==39303== Memcheck, a memory error detector ==39303== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39303== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39303== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==39303== Parent PID: 23896 ==39303== ==39303== ==39303== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39303== Open file descriptor 12: ==39303== at 0x10E580FD: pipe (pipe.c:29) ==39303== by 0x1972F07D: ??? ==39303== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39303== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39303== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39303== by 0xF64ED38: PetscInitialize (pinit.c:924) ==39303== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39303== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39303== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39303== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39303== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39303== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39303== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39303== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39303== ==39303== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39303== at 0x10E5CA9C: __open_nocancel (open64_nocancel.c:39) ==39303== by 0x10DE0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39303== by 0xF1B0822: ??? ==39303== by 0xF1B096F: ??? ==39303== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39303== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39303== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39303== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39303== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39303== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39303== by 0xF64ED38: PetscInitialize (pinit.c:924) ==39303== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39303== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39303== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39303== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39303== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39303== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39303== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39303== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39303== ==39303== Open file descriptor 145: ==39303== ==39303== ==39303== Open file descriptor 142: ==39303== ==39303== ==39303== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==39303== ==39303== ==39303== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39303== ==39303== ==39303== ==39303== HEAP SUMMARY: ==39303== in use at exit: 36,612 bytes in 307 blocks ==39303== total heap usage: 8,962,476 allocs, 8,962,169 frees, 859,028,059 bytes allocated ==39303== ==39303== LEAK SUMMARY: ==39303== definitely lost: 0 bytes in 0 blocks ==39303== indirectly lost: 0 bytes in 0 blocks ==39303== possibly lost: 0 bytes in 0 blocks ==39303== still reachable: 56 bytes in 3 blocks ==39303== suppressed: 36,556 bytes in 304 blocks ==39303== Reachable blocks (those to which a pointer was found) are not shown. ==39303== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39303== ==39303== For lists of detected and suppressed errors, rerun with: -s ==39303== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)