==25858== Memcheck, a memory error detector ==25858== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25858== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25858== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestT2SwapCellKiller -malloc_debug -malloc_dump -memory_info ==25858== Parent PID: 23896 ==25858== ==25858== ==25858== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25858== Open file descriptor 12: ==25858== at 0x10D710FD: pipe (pipe.c:29) ==25858== by 0x1972F07D: ??? ==25858== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25858== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25858== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25858== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25858== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25858== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25858== by 0x149AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25858== by 0x1426D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25858== by 0x145504: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25858== by 0x1453A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25858== by 0x145A3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25858== by 0x140AF5: main (TestT2SwapCellKiller.cpp:19) ==25858== ==25858== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25858== at 0x10D75A9C: __open_nocancel (open64_nocancel.c:39) ==25858== by 0x10CF9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25858== by 0xF1B0822: ??? ==25858== by 0xF1B096F: ??? ==25858== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25858== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25858== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25858== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25858== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25858== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25858== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25858== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25858== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25858== by 0x149AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25858== by 0x1426D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25858== by 0x145504: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25858== by 0x1453A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25858== by 0x145A3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25858== by 0x140AF5: main (TestT2SwapCellKiller.cpp:19) ==25858== ==25858== Open file descriptor 145: ==25858== ==25858== ==25858== Open file descriptor 142: ==25858== ==25858== ==25858== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestT2SwapCellKiller_valgrind.txt ==25858== ==25858== ==25858== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25858== ==25858== ==25858== ==25858== HEAP SUMMARY: ==25858== in use at exit: 36,685 bytes in 311 blocks ==25858== total heap usage: 61,688 allocs, 61,377 frees, 12,615,057 bytes allocated ==25858== ==25858== LEAK SUMMARY: ==25858== definitely lost: 0 bytes in 0 blocks ==25858== indirectly lost: 0 bytes in 0 blocks ==25858== possibly lost: 0 bytes in 0 blocks ==25858== still reachable: 56 bytes in 3 blocks ==25858== suppressed: 36,629 bytes in 308 blocks ==25858== Reachable blocks (those to which a pointer was found) are not shown. ==25858== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25858== ==25858== For lists of detected and suppressed errors, rerun with: -s ==25858== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)