==26336== Memcheck, a memory error detector ==26336== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26336== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26336== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26336== Parent PID: 24205 ==26336== ==26336== ==26336== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26336== Open file descriptor 12: ==26336== at 0x10E650FD: pipe (pipe.c:29) ==26336== by 0x1982207D: ??? ==26336== by 0x14DD84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26336== by 0x10AB2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26336== by 0x10A4BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26336== by 0xF742D38: PetscInitialize (pinit.c:924) ==26336== by 0xF26CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26336== by 0xF26CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26336== by 0x3F7569: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26336== by 0x3EC0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26336== by 0x3F2114: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26336== by 0x3F1FB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26336== by 0x3F264B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26336== by 0x3EA515: main (TestVertexBasedCellPopulation.cpp:19) ==26336== ==26336== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26336== at 0x10E69A9C: __open_nocancel (open64_nocancel.c:39) ==26336== by 0x10DEDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26336== by 0xF2AA822: ??? ==26336== by 0xF2AA96F: ??? ==26336== by 0x14E7D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26336== by 0x14E7D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26336== by 0x14E33922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26336== by 0x14DD82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26336== by 0x10AB2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26336== by 0x10A4BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26336== by 0xF742D38: PetscInitialize (pinit.c:924) ==26336== by 0xF26CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26336== by 0xF26CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26336== by 0x3F7569: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26336== by 0x3EC0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26336== by 0x3F2114: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26336== by 0x3F1FB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26336== by 0x3F264B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26336== by 0x3EA515: main (TestVertexBasedCellPopulation.cpp:19) ==26336== ==26336== Open file descriptor 145: ==26336== ==26336== ==26336== Open file descriptor 142: ==26336== ==26336== ==26336== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulation_valgrind.txt ==26336== ==26336== ==26336== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26336== ==26336== ==26336== ==26336== HEAP SUMMARY: ==26336== in use at exit: 35,199 bytes in 290 blocks ==26336== total heap usage: 154,925 allocs, 154,635 frees, 19,370,240 bytes allocated ==26336== ==26336== LEAK SUMMARY: ==26336== definitely lost: 0 bytes in 0 blocks ==26336== indirectly lost: 0 bytes in 0 blocks ==26336== possibly lost: 0 bytes in 0 blocks ==26336== still reachable: 56 bytes in 3 blocks ==26336== suppressed: 35,143 bytes in 287 blocks ==26336== Reachable blocks (those to which a pointer was found) are not shown. ==26336== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26336== ==26336== For lists of detected and suppressed errors, rerun with: -s ==26336== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)