==41274== Memcheck, a memory error detector ==41274== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41274== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41274== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==41274== Parent PID: 24782 ==41274== ==41274== ==41274== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41274== Open file descriptor 12: ==41274== at 0x127CA0FD: pipe (pipe.c:29) ==41274== by 0x1B4E307D: ??? ==41274== by 0x166724CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41274== by 0x11FEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41274== by 0x11F84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41274== by 0x6210D38: PetscInitialize (pinit.c:924) ==41274== by 0x11EAAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41274== by 0x11EAAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41274== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41274== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41274== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41274== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41274== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41274== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41274== ==41274== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41274== at 0x127CEA9C: __open_nocancel (open64_nocancel.c:39) ==41274== by 0x12752BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41274== by 0x11EE8822: ??? ==41274== by 0x11EE896F: ??? ==41274== by 0x167176DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41274== by 0x16717938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41274== by 0x166CD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41274== by 0x166722DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41274== by 0x11FEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41274== by 0x11F84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41274== by 0x6210D38: PetscInitialize (pinit.c:924) ==41274== by 0x11EAAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41274== by 0x11EAAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41274== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41274== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41274== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41274== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41274== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41274== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41274== ==41274== Open file descriptor 145: ==41274== ==41274== ==41274== Open file descriptor 142: ==41274== ==41274== ==41274== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==41274== ==41274== ==41274== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41274== ==41274== ==41274== ==41274== HEAP SUMMARY: ==41274== in use at exit: 35,215 bytes in 290 blocks ==41274== total heap usage: 1,389,340 allocs, 1,389,050 frees, 124,374,179 bytes allocated ==41274== ==41274== LEAK SUMMARY: ==41274== definitely lost: 0 bytes in 0 blocks ==41274== indirectly lost: 0 bytes in 0 blocks ==41274== possibly lost: 0 bytes in 0 blocks ==41274== still reachable: 56 bytes in 3 blocks ==41274== suppressed: 35,159 bytes in 287 blocks ==41274== Reachable blocks (those to which a pointer was found) are not shown. ==41274== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41274== ==41274== For lists of detected and suppressed errors, rerun with: -s ==41274== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)