==41055== Memcheck, a memory error detector ==41055== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41055== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41055== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==41055== Parent PID: 24782 ==41055== ==41055== ==41055== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41055== Open file descriptor 12: ==41055== at 0x10ABE0FD: pipe (pipe.c:29) ==41055== by 0x1B4E307D: ??? ==41055== by 0x156334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41055== by 0x103C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41055== by 0x1035FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41055== by 0x6277D38: PetscInitialize (pinit.c:924) ==41055== by 0x102A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41055== by 0x102A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41055== by 0x18F219: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41055== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41055== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41055== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41055== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41055== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==41055== ==41055== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41055== at 0x10AC2A9C: __open_nocancel (open64_nocancel.c:39) ==41055== by 0x10A46BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41055== by 0x6122822: ??? ==41055== by 0x612296F: ??? ==41055== by 0x156D86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41055== by 0x156D8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41055== by 0x1568E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41055== by 0x156332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41055== by 0x103C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41055== by 0x1035FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41055== by 0x6277D38: PetscInitialize (pinit.c:924) ==41055== by 0x102A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41055== by 0x102A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41055== by 0x18F219: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41055== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41055== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41055== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41055== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41055== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==41055== ==41055== Open file descriptor 145: ==41055== ==41055== ==41055== Open file descriptor 142: ==41055== ==41055== ==41055== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==41055== ==41055== ==41055== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41055== ==41055== ==41055== ==41055== HEAP SUMMARY: ==41055== in use at exit: 35,279 bytes in 291 blocks ==41055== total heap usage: 738,575 allocs, 738,284 frees, 41,699,300 bytes allocated ==41055== ==41055== LEAK SUMMARY: ==41055== definitely lost: 0 bytes in 0 blocks ==41055== indirectly lost: 0 bytes in 0 blocks ==41055== possibly lost: 0 bytes in 0 blocks ==41055== still reachable: 120 bytes in 4 blocks ==41055== suppressed: 35,159 bytes in 287 blocks ==41055== Reachable blocks (those to which a pointer was found) are not shown. ==41055== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41055== ==41055== For lists of detected and suppressed errors, rerun with: -s ==41055== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)