==26274== Memcheck, a memory error detector ==26274== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26274== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26274== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26274== Parent PID: 24255 ==26274== ==26274== ==26274== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26274== Open file descriptor 12: ==26274== at 0xFA970FD: pipe (pipe.c:29) ==26274== by 0x1982207D: ??? ==26274== by 0x12C644CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26274== by 0x1038F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26274== by 0x10328D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26274== by 0x104D4D38: PetscInitialize (pinit.c:924) ==26274== by 0xF26CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26274== by 0xF26CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26274== by 0x2F3CF0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26274== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26274== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26274== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26274== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26274== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26274== ==26274== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26274== at 0xFA9BA9C: __open_nocancel (open64_nocancel.c:39) ==26274== by 0xFA1FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26274== by 0xF2AA822: ??? ==26274== by 0xF2AA96F: ??? ==26274== by 0x12D096DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26274== by 0x12D09938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26274== by 0x12CBF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26274== by 0x12C642DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26274== by 0x1038F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26274== by 0x10328D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26274== by 0x104D4D38: PetscInitialize (pinit.c:924) ==26274== by 0xF26CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26274== by 0xF26CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26274== by 0x2F3CF0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26274== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26274== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26274== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26274== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26274== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26274== ==26274== Open file descriptor 145: ==26274== ==26274== ==26274== Open file descriptor 142: ==26274== ==26274== ==26274== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==26274== ==26274== ==26274== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26274== ==26274== ==26274== ==26274== HEAP SUMMARY: ==26274== in use at exit: 35,199 bytes in 290 blocks ==26274== total heap usage: 131,783 allocs, 131,493 frees, 35,873,127 bytes allocated ==26274== ==26274== LEAK SUMMARY: ==26274== definitely lost: 0 bytes in 0 blocks ==26274== indirectly lost: 0 bytes in 0 blocks ==26274== possibly lost: 0 bytes in 0 blocks ==26274== still reachable: 56 bytes in 3 blocks ==26274== suppressed: 35,143 bytes in 287 blocks ==26274== Reachable blocks (those to which a pointer was found) are not shown. ==26274== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26274== ==26274== For lists of detected and suppressed errors, rerun with: -s ==26274== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)