==25689== Memcheck, a memory error detector ==25689== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25689== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25689== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==25689== Parent PID: 24280 ==25689== ==25689== ==25689== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25689== Open file descriptor 12: ==25689== at 0xF0FB0FD: pipe (pipe.c:29) ==25689== by 0x1982307D: ??? ==25689== by 0x13DC44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25689== by 0xED48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25689== by 0xECE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25689== by 0xD9D8D38: PetscInitialize (pinit.c:924) ==25689== by 0xD847E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25689== by 0xD847EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25689== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25689== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25689== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25689== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25689== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25689== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25689== ==25689== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25689== at 0xF0FFA9C: __open_nocancel (open64_nocancel.c:39) ==25689== by 0xF083BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25689== by 0xD885822: ??? ==25689== by 0xD88596F: ??? ==25689== by 0x13E696DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25689== by 0x13E69938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25689== by 0x13E1F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25689== by 0x13DC42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25689== by 0xED48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25689== by 0xECE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25689== by 0xD9D8D38: PetscInitialize (pinit.c:924) ==25689== by 0xD847E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25689== by 0xD847EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25689== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25689== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25689== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25689== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25689== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25689== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25689== ==25689== Open file descriptor 145: ==25689== ==25689== ==25689== Open file descriptor 142: ==25689== ==25689== ==25689== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==25689== ==25689== ==25689== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25689== ==25689== ==25689== ==25689== HEAP SUMMARY: ==25689== in use at exit: 35,142 bytes in 287 blocks ==25689== total heap usage: 4,163,135 allocs, 4,162,848 frees, 438,992,028 bytes allocated ==25689== ==25689== LEAK SUMMARY: ==25689== definitely lost: 0 bytes in 0 blocks ==25689== indirectly lost: 0 bytes in 0 blocks ==25689== possibly lost: 0 bytes in 0 blocks ==25689== still reachable: 72 bytes in 4 blocks ==25689== suppressed: 35,070 bytes in 283 blocks ==25689== Reachable blocks (those to which a pointer was found) are not shown. ==25689== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25689== ==25689== For lists of detected and suppressed errors, rerun with: -s ==25689== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)