==40207== Memcheck, a memory error detector ==40207== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40207== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40207== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==40207== Parent PID: 24197 ==40207== ==40207== ==40207== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40207== Open file descriptor 12: ==40207== at 0x1118E0FD: pipe (pipe.c:29) ==40207== by 0x1982207D: ??? ==40207== by 0x14E2E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40207== by 0x10CF4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40207== by 0x10C8DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40207== by 0xF984D38: PetscInitialize (pinit.c:924) ==40207== by 0xF4AEE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40207== by 0xF4AEEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40207== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40207== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40207== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40207== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40207== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40207== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==40207== ==40207== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40207== at 0x11192A9C: __open_nocancel (open64_nocancel.c:39) ==40207== by 0x11116BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40207== by 0xF4EC822: ??? ==40207== by 0xF4EC96F: ??? ==40207== by 0x14ED36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40207== by 0x14ED3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40207== by 0x14E89922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40207== by 0x14E2E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40207== by 0x10CF4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40207== by 0x10C8DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40207== by 0xF984D38: PetscInitialize (pinit.c:924) ==40207== by 0xF4AEE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40207== by 0xF4AEEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40207== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40207== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40207== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40207== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40207== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40207== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==40207== ==40207== Open file descriptor 145: ==40207== ==40207== ==40207== Open file descriptor 142: ==40207== ==40207== ==40207== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==40207== ==40207== ==40207== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40207== ==40207== ==40207== ==40207== HEAP SUMMARY: ==40207== in use at exit: 35,126 bytes in 286 blocks ==40207== total heap usage: 3,804,075 allocs, 3,803,789 frees, 178,890,584 bytes allocated ==40207== ==40207== LEAK SUMMARY: ==40207== definitely lost: 0 bytes in 0 blocks ==40207== indirectly lost: 0 bytes in 0 blocks ==40207== possibly lost: 0 bytes in 0 blocks ==40207== still reachable: 56 bytes in 3 blocks ==40207== suppressed: 35,070 bytes in 283 blocks ==40207== Reachable blocks (those to which a pointer was found) are not shown. ==40207== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40207== ==40207== For lists of detected and suppressed errors, rerun with: -s ==40207== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)