==40706== Memcheck, a memory error detector ==40706== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40706== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40706== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40706== Parent PID: 24197 ==40706== ==40706== ==40706== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40706== Open file descriptor 12: ==40706== at 0x109BB0FD: pipe (pipe.c:29) ==40706== by 0x1B4E407D: ??? ==40706== by 0x156844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40706== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40706== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40706== by 0x6277D38: PetscInitialize (pinit.c:924) ==40706== by 0x104EAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40706== by 0x104EAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40706== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40706== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40706== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40706== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40706== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40706== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40706== ==40706== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40706== at 0x109BFA9C: __open_nocancel (open64_nocancel.c:39) ==40706== by 0x10943BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40706== by 0x6122822: ??? ==40706== by 0x612296F: ??? ==40706== by 0x157296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40706== by 0x15729938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40706== by 0x156DF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40706== by 0x156842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40706== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40706== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40706== by 0x6277D38: PetscInitialize (pinit.c:924) ==40706== by 0x104EAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40706== by 0x104EAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40706== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40706== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40706== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40706== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40706== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40706== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40706== ==40706== Open file descriptor 145: ==40706== ==40706== ==40706== Open file descriptor 142: ==40706== ==40706== ==40706== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40706== ==40706== ==40706== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40706== ==40706== ==40706== ==40706== HEAP SUMMARY: ==40706== in use at exit: 35,183 bytes in 289 blocks ==40706== total heap usage: 169,419 allocs, 169,130 frees, 88,841,728 bytes allocated ==40706== ==40706== LEAK SUMMARY: ==40706== definitely lost: 0 bytes in 0 blocks ==40706== indirectly lost: 0 bytes in 0 blocks ==40706== possibly lost: 0 bytes in 0 blocks ==40706== still reachable: 24 bytes in 2 blocks ==40706== suppressed: 35,159 bytes in 287 blocks ==40706== Reachable blocks (those to which a pointer was found) are not shown. ==40706== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40706== ==40706== For lists of detected and suppressed errors, rerun with: -s ==40706== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)