==39998== Memcheck, a memory error detector ==39998== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39998== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39998== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial -malloc_debug -malloc_dump -memory_info ==39998== Parent PID: 24128 ==39998== ==39998== ==39998== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39998== Open file descriptor 12: ==39998== at 0x1105D0FD: pipe (pipe.c:29) ==39998== by 0x19A1B07D: ??? ==39998== by 0x14FCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39998== by 0x10CAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39998== by 0x10C43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39998== by 0xF93AD38: PetscInitialize (pinit.c:924) ==39998== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39998== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39998== by 0x144105: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39998== by 0x13EF9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39998== by 0x141686: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39998== by 0x141582: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39998== by 0x141B95: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39998== by 0x13D795: main (TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial.cpp:18) ==39998== ==39998== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39998== at 0x11061A9C: __open_nocancel (open64_nocancel.c:39) ==39998== by 0x10FE5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39998== by 0xF4A2822: ??? ==39998== by 0xF4A296F: ??? ==39998== by 0x150726DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39998== by 0x15072938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39998== by 0x15028922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39998== by 0x14FCD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39998== by 0x10CAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39998== by 0x10C43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39998== by 0xF93AD38: PetscInitialize (pinit.c:924) ==39998== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39998== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39998== by 0x144105: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39998== by 0x13EF9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39998== by 0x141686: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39998== by 0x141582: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39998== by 0x141B95: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39998== by 0x13D795: main (TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial.cpp:18) ==39998== ==39998== Open file descriptor 145: ==39998== ==39998== ==39998== Open file descriptor 142: ==39998== ==39998== ==39998== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial_valgrind.txt ==39998== ==39998== ==39998== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39998== ==39998== ==39998== ==39998== HEAP SUMMARY: ==39998== in use at exit: 35,199 bytes in 290 blocks ==39998== total heap usage: 411,033 allocs, 410,743 frees, 62,794,406 bytes allocated ==39998== ==39998== LEAK SUMMARY: ==39998== definitely lost: 0 bytes in 0 blocks ==39998== indirectly lost: 0 bytes in 0 blocks ==39998== possibly lost: 0 bytes in 0 blocks ==39998== still reachable: 56 bytes in 3 blocks ==39998== suppressed: 35,143 bytes in 287 blocks ==39998== Reachable blocks (those to which a pointer was found) are not shown. ==39998== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39998== ==39998== For lists of detected and suppressed errors, rerun with: -s ==39998== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)