==40018== Memcheck, a memory error detector ==40018== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40018== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40018== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==40018== Parent PID: 24128 ==40018== ==40018== ==40018== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40018== Open file descriptor 12: ==40018== at 0x113860FD: pipe (pipe.c:29) ==40018== by 0x19A1B07D: ??? ==40018== by 0x1501E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40018== by 0x10EEC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40018== by 0x10E85D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40018== by 0xFB7CD38: PetscInitialize (pinit.c:924) ==40018== by 0xF6A6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40018== by 0xF6A6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40018== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40018== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40018== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40018== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40018== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40018== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==40018== ==40018== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40018== at 0x1138AA9C: __open_nocancel (open64_nocancel.c:39) ==40018== by 0x1130EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40018== by 0xF6E4822: ??? ==40018== by 0xF6E496F: ??? ==40018== by 0x150C36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40018== by 0x150C3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40018== by 0x15079922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40018== by 0x1501E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40018== by 0x10EEC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40018== by 0x10E85D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40018== by 0xFB7CD38: PetscInitialize (pinit.c:924) ==40018== by 0xF6A6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40018== by 0xF6A6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40018== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40018== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40018== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40018== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40018== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40018== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==40018== ==40018== Open file descriptor 145: ==40018== ==40018== ==40018== Open file descriptor 142: ==40018== ==40018== ==40018== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==40018== ==40018== ==40018== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40018== ==40018== ==40018== ==40018== HEAP SUMMARY: ==40018== in use at exit: 35,126 bytes in 286 blocks ==40018== total heap usage: 3,801,513 allocs, 3,801,227 frees, 178,429,387 bytes allocated ==40018== ==40018== LEAK SUMMARY: ==40018== definitely lost: 0 bytes in 0 blocks ==40018== indirectly lost: 0 bytes in 0 blocks ==40018== possibly lost: 0 bytes in 0 blocks ==40018== still reachable: 56 bytes in 3 blocks ==40018== suppressed: 35,070 bytes in 283 blocks ==40018== Reachable blocks (those to which a pointer was found) are not shown. ==40018== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40018== ==40018== For lists of detected and suppressed errors, rerun with: -s ==40018== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)