==26200== Memcheck, a memory error detector ==26200== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26200== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26200== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26200== Parent PID: 24128 ==26200== ==26200== ==26200== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26200== Open file descriptor 12: ==26200== at 0xFC370FD: pipe (pipe.c:29) ==26200== by 0x19A1D07D: ??? ==26200== by 0x12E644CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26200== by 0x104A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26200== by 0x10439D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26200== by 0x105E5D38: PetscInitialize (pinit.c:924) ==26200== by 0xF4F3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26200== by 0xF4F3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26200== by 0x2E35E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26200== by 0x2DA0D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26200== by 0x2DE936: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26200== by 0x2DE7D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26200== by 0x2DEE6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26200== by 0x2D84F5: main (TestNodeBasedCellPopulation.cpp:19) ==26200== ==26200== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26200== at 0xFC3BA9C: __open_nocancel (open64_nocancel.c:39) ==26200== by 0xFBBFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26200== by 0xF531822: ??? ==26200== by 0xF53196F: ??? ==26200== by 0x12F096DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26200== by 0x12F09938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26200== by 0x12EBF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26200== by 0x12E642DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26200== by 0x104A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26200== by 0x10439D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26200== by 0x105E5D38: PetscInitialize (pinit.c:924) ==26200== by 0xF4F3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26200== by 0xF4F3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26200== by 0x2E35E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26200== by 0x2DA0D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26200== by 0x2DE936: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26200== by 0x2DE7D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26200== by 0x2DEE6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26200== by 0x2D84F5: main (TestNodeBasedCellPopulation.cpp:19) ==26200== ==26200== Open file descriptor 145: ==26200== ==26200== ==26200== Open file descriptor 142: ==26200== ==26200== ==26200== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26200== ==26200== ==26200== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26200== ==26200== ==26200== ==26200== HEAP SUMMARY: ==26200== in use at exit: 35,126 bytes in 286 blocks ==26200== total heap usage: 30,274,713 allocs, 30,274,427 frees, 1,833,696,523 bytes allocated ==26200== ==26200== LEAK SUMMARY: ==26200== definitely lost: 0 bytes in 0 blocks ==26200== indirectly lost: 0 bytes in 0 blocks ==26200== possibly lost: 0 bytes in 0 blocks ==26200== still reachable: 56 bytes in 3 blocks ==26200== suppressed: 35,070 bytes in 283 blocks ==26200== Reachable blocks (those to which a pointer was found) are not shown. ==26200== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26200== ==26200== For lists of detected and suppressed errors, rerun with: -s ==26200== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)