==40422== Memcheck, a memory error detector ==40422== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40422== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40422== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==40422== Parent PID: 24128 ==40422== ==40422== ==40422== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40422== Open file descriptor 12: ==40422== at 0x10CF30FD: pipe (pipe.c:29) ==40422== by 0x1B71907D: ??? ==40422== by 0x158684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40422== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40422== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40422== by 0x62B4D38: PetscInitialize (pinit.c:924) ==40422== by 0x104DDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40422== by 0x104DDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40422== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40422== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40422== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40422== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40422== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40422== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==40422== ==40422== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40422== at 0x10CF7A9C: __open_nocancel (open64_nocancel.c:39) ==40422== by 0x10C7BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40422== by 0x615F822: ??? ==40422== by 0x615F96F: ??? ==40422== by 0x1590D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40422== by 0x1590D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40422== by 0x158C3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40422== by 0x158682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40422== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40422== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40422== by 0x62B4D38: PetscInitialize (pinit.c:924) ==40422== by 0x104DDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40422== by 0x104DDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40422== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40422== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40422== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40422== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40422== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40422== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==40422== ==40422== Open file descriptor 145: ==40422== ==40422== ==40422== Open file descriptor 142: ==40422== ==40422== ==40422== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==40422== ==40422== ==40422== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40422== ==40422== ==40422== ==40422== HEAP SUMMARY: ==40422== in use at exit: 35,359 bytes in 292 blocks ==40422== total heap usage: 247,111 allocs, 246,819 frees, 26,224,704 bytes allocated ==40422== ==40422== LEAK SUMMARY: ==40422== definitely lost: 0 bytes in 0 blocks ==40422== indirectly lost: 0 bytes in 0 blocks ==40422== possibly lost: 0 bytes in 0 blocks ==40422== still reachable: 200 bytes in 5 blocks ==40422== suppressed: 35,159 bytes in 287 blocks ==40422== Reachable blocks (those to which a pointer was found) are not shown. ==40422== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40422== ==40422== For lists of detected and suppressed errors, rerun with: -s ==40422== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)