==26489== Memcheck, a memory error detector ==26489== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26489== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26489== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==26489== Parent PID: 24470 ==26489== ==26489== ==26489== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26489== Open file descriptor 12: ==26489== at 0xF85B0FD: pipe (pipe.c:29) ==26489== by 0x196CF07D: ??? ==26489== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26489== by 0x10155418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0x100EED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0x1029AD38: PetscInitialize (pinit.c:924) ==26489== by 0xF119E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26489== by 0xF119EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26489== by 0x2CB4CE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26489== by 0x2C2ADF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26489== by 0x2C6EF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26489== by 0x2C6DF3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26489== by 0x2C7407: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26489== by 0x2C12D5: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==26489== ==26489== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26489== at 0xF85FA9C: __open_nocancel (open64_nocancel.c:39) ==26489== by 0xF7E3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26489== by 0xF157822: ??? ==26489== by 0xF15796F: ??? ==26489== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26489== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26489== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26489== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26489== by 0x10155418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0x100EED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0x1029AD38: PetscInitialize (pinit.c:924) ==26489== by 0xF119E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26489== by 0xF119EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26489== by 0x2CB4CE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26489== by 0x2C2ADF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26489== by 0x2C6EF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26489== by 0x2C6DF3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26489== by 0x2C7407: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26489== by 0x2C12D5: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==26489== ==26489== Open file descriptor 145: ==26489== ==26489== ==26489== Open file descriptor 142: ==26489== ==26489== ==26489== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==26489== ==26489== ==26489== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26489== ==26489== ==26489== ==26489== HEAP SUMMARY: ==26489== in use at exit: 35,199 bytes in 290 blocks ==26489== total heap usage: 41,066 allocs, 40,776 frees, 9,146,318 bytes allocated ==26489== ==26489== LEAK SUMMARY: ==26489== definitely lost: 0 bytes in 0 blocks ==26489== indirectly lost: 0 bytes in 0 blocks ==26489== possibly lost: 0 bytes in 0 blocks ==26489== still reachable: 56 bytes in 3 blocks ==26489== suppressed: 35,143 bytes in 287 blocks ==26489== Reachable blocks (those to which a pointer was found) are not shown. ==26489== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26489== ==26489== For lists of detected and suppressed errors, rerun with: -s ==26489== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)