==27375== Memcheck, a memory error detector ==27375== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27375== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27375== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==27375== Parent PID: 24470 ==27375== ==27375== ==27375== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27375== Open file descriptor 12: ==27375== at 0xFCE10FD: pipe (pipe.c:29) ==27375== by 0x196D007D: ??? ==27375== by 0x12B294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27375== by 0x1023C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x101D5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x10381D38: PetscInitialize (pinit.c:924) ==27375== by 0xF4B6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27375== by 0xF4B6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27375== by 0x222440: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27375== by 0x21BB31: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27375== by 0x21F66A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27375== by 0x21F50A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27375== by 0x21FBA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27375== by 0x219F15: main (TestOffLatticeSimulationWithPdes.cpp:19) ==27375== ==27375== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27375== at 0xFCE5A9C: __open_nocancel (open64_nocancel.c:39) ==27375== by 0xFC69BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27375== by 0xF4F4822: ??? ==27375== by 0xF4F496F: ??? ==27375== by 0x12BCE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27375== by 0x12BCE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27375== by 0x12B84922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27375== by 0x12B292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27375== by 0x1023C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x101D5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x10381D38: PetscInitialize (pinit.c:924) ==27375== by 0xF4B6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27375== by 0xF4B6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27375== by 0x222440: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27375== by 0x21BB31: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27375== by 0x21F66A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27375== by 0x21F50A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27375== by 0x21FBA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27375== by 0x219F15: main (TestOffLatticeSimulationWithPdes.cpp:19) ==27375== ==27375== Open file descriptor 145: ==27375== ==27375== ==27375== Open file descriptor 142: ==27375== ==27375== ==27375== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==27375== ==27375== ==27375== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27375== ==27375== ==27375== ==27375== HEAP SUMMARY: ==27375== in use at exit: 35,126 bytes in 286 blocks ==27375== total heap usage: 8,105,315 allocs, 8,105,029 frees, 1,364,721,036 bytes allocated ==27375== ==27375== LEAK SUMMARY: ==27375== definitely lost: 0 bytes in 0 blocks ==27375== indirectly lost: 0 bytes in 0 blocks ==27375== possibly lost: 0 bytes in 0 blocks ==27375== still reachable: 56 bytes in 3 blocks ==27375== suppressed: 35,070 bytes in 283 blocks ==27375== Reachable blocks (those to which a pointer was found) are not shown. ==27375== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27375== ==27375== For lists of detected and suppressed errors, rerun with: -s ==27375== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)