==41953== Memcheck, a memory error detector ==41953== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41953== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41953== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==41953== Parent PID: 24478 ==41953== ==41953== ==41953== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41953== Open file descriptor 12: ==41953== at 0x85950FD: pipe (pipe.c:29) ==41953== by 0x1435907D: ??? ==41953== by 0xC8D04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41953== by 0x8963418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41953== by 0x88FCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41953== by 0x8E3ED38: PetscInitialize (pinit.c:924) ==41953== by 0x81BEE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41953== by 0x81BEEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41953== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41953== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41953== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41953== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41953== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41953== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41953== ==41953== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41953== at 0x8599A9C: __open_nocancel (open64_nocancel.c:39) ==41953== by 0x851DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41953== by 0x81FC822: ??? ==41953== by 0x81FC96F: ??? ==41953== by 0xC9756DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41953== by 0xC975938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41953== by 0xC92B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41953== by 0xC8D02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41953== by 0x8963418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41953== by 0x88FCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41953== by 0x8E3ED38: PetscInitialize (pinit.c:924) ==41953== by 0x81BEE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41953== by 0x81BEEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41953== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41953== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41953== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41953== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41953== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41953== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41953== ==41953== Open file descriptor 145: ==41953== ==41953== ==41953== Open file descriptor 142: ==41953== ==41953== ==41953== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==41953== ==41953== ==41953== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41953== ==41953== ==41953== ==41953== HEAP SUMMARY: ==41953== in use at exit: 35,183 bytes in 289 blocks ==41953== total heap usage: 32,818 allocs, 32,529 frees, 7,449,223 bytes allocated ==41953== ==41953== LEAK SUMMARY: ==41953== definitely lost: 0 bytes in 0 blocks ==41953== indirectly lost: 0 bytes in 0 blocks ==41953== possibly lost: 0 bytes in 0 blocks ==41953== still reachable: 24 bytes in 2 blocks ==41953== suppressed: 35,159 bytes in 287 blocks ==41953== Reachable blocks (those to which a pointer was found) are not shown. ==41953== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41953== ==41953== For lists of detected and suppressed errors, rerun with: -s ==41953== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)