==26403== Memcheck, a memory error detector ==26403== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26403== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26403== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26403== Parent PID: 24478 ==26403== ==26403== ==26403== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26403== Open file descriptor 12: ==26403== at 0xF9460FD: pipe (pipe.c:29) ==26403== by 0x196D207D: ??? ==26403== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26403== by 0x1023E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26403== by 0x101D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26403== by 0x10383D38: PetscInitialize (pinit.c:924) ==26403== by 0xF11BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26403== by 0xF11BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26403== by 0x2F3BC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26403== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26403== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26403== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26403== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26403== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26403== ==26403== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26403== at 0xF94AA9C: __open_nocancel (open64_nocancel.c:39) ==26403== by 0xF8CEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26403== by 0xF159822: ??? ==26403== by 0xF15996F: ??? ==26403== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26403== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26403== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26403== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26403== by 0x1023E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26403== by 0x101D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26403== by 0x10383D38: PetscInitialize (pinit.c:924) ==26403== by 0xF11BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26403== by 0xF11BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26403== by 0x2F3BC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26403== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26403== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26403== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26403== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26403== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26403== ==26403== Open file descriptor 145: ==26403== ==26403== ==26403== Open file descriptor 142: ==26403== ==26403== ==26403== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==26403== ==26403== ==26403== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26403== ==26403== ==26403== ==26403== HEAP SUMMARY: ==26403== in use at exit: 35,199 bytes in 290 blocks ==26403== total heap usage: 131,741 allocs, 131,451 frees, 35,869,511 bytes allocated ==26403== ==26403== LEAK SUMMARY: ==26403== definitely lost: 0 bytes in 0 blocks ==26403== indirectly lost: 0 bytes in 0 blocks ==26403== possibly lost: 0 bytes in 0 blocks ==26403== still reachable: 56 bytes in 3 blocks ==26403== suppressed: 35,143 bytes in 287 blocks ==26403== Reachable blocks (those to which a pointer was found) are not shown. ==26403== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26403== ==26403== For lists of detected and suppressed errors, rerun with: -s ==26403== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)