==26333== Memcheck, a memory error detector ==26333== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26333== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26333== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==26333== Parent PID: 24162 ==26333== ==26333== ==26333== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26333== Open file descriptor 12: ==26333== at 0xFB640FD: pipe (pipe.c:29) ==26333== by 0x19A1D07D: ??? ==26333== by 0x12E644CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26333== by 0x1045C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26333== by 0x103F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26333== by 0x105E5D38: PetscInitialize (pinit.c:924) ==26333== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26333== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26333== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26333== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26333== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26333== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26333== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26333== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26333== ==26333== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26333== at 0xFB68A9C: __open_nocancel (open64_nocancel.c:39) ==26333== by 0xFAECBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26333== by 0xF4A2822: ??? ==26333== by 0xF4A296F: ??? ==26333== by 0x12F096DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26333== by 0x12F09938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26333== by 0x12EBF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26333== by 0x12E642DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26333== by 0x1045C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26333== by 0x103F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26333== by 0x105E5D38: PetscInitialize (pinit.c:924) ==26333== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26333== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26333== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26333== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26333== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26333== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26333== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26333== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26333== ==26333== Open file descriptor 145: ==26333== ==26333== ==26333== Open file descriptor 142: ==26333== ==26333== ==26333== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==26333== ==26333== ==26333== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26333== ==26333== ==26333== ==26333== HEAP SUMMARY: ==26333== in use at exit: 35,199 bytes in 290 blocks ==26333== total heap usage: 1,108,543 allocs, 1,108,253 frees, 84,857,817 bytes allocated ==26333== ==26333== LEAK SUMMARY: ==26333== definitely lost: 0 bytes in 0 blocks ==26333== indirectly lost: 0 bytes in 0 blocks ==26333== possibly lost: 0 bytes in 0 blocks ==26333== still reachable: 56 bytes in 3 blocks ==26333== suppressed: 35,143 bytes in 287 blocks ==26333== Reachable blocks (those to which a pointer was found) are not shown. ==26333== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26333== ==26333== For lists of detected and suppressed errors, rerun with: -s ==26333== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)