==25509== Memcheck, a memory error detector ==25509== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25509== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25509== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==25509== Parent PID: 24162 ==25509== ==25509== ==25509== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25509== Open file descriptor 12: ==25509== at 0xF06D0FD: pipe (pipe.c:29) ==25509== by 0x19A1A07D: ??? ==25509== by 0x13F6B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25509== by 0xECBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0xEC55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0xD929D38: PetscInitialize (pinit.c:924) ==25509== by 0xD7FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25509== by 0xD7FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25509== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25509== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25509== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25509== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25509== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25509== by 0x113935: main (TestCellSrn.cpp:18) ==25509== ==25509== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25509== at 0xF071A9C: __open_nocancel (open64_nocancel.c:39) ==25509== by 0xEFF5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25509== by 0xEBB9822: ??? ==25509== by 0xEBB996F: ??? ==25509== by 0x140106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25509== by 0x14010938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25509== by 0x13FC6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25509== by 0x13F6B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25509== by 0xECBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0xEC55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25509== by 0xD929D38: PetscInitialize (pinit.c:924) ==25509== by 0xD7FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25509== by 0xD7FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25509== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25509== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25509== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25509== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25509== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25509== by 0x113935: main (TestCellSrn.cpp:18) ==25509== ==25509== Open file descriptor 145: ==25509== ==25509== ==25509== Open file descriptor 142: ==25509== ==25509== ==25509== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==25509== ==25509== ==25509== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25509== ==25509== ==25509== ==25509== HEAP SUMMARY: ==25509== in use at exit: 35,263 bytes in 291 blocks ==25509== total heap usage: 47,359 allocs, 47,068 frees, 8,318,781 bytes allocated ==25509== ==25509== LEAK SUMMARY: ==25509== definitely lost: 0 bytes in 0 blocks ==25509== indirectly lost: 0 bytes in 0 blocks ==25509== possibly lost: 0 bytes in 0 blocks ==25509== still reachable: 120 bytes in 4 blocks ==25509== suppressed: 35,143 bytes in 287 blocks ==25509== Reachable blocks (those to which a pointer was found) are not shown. ==25509== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25509== ==25509== For lists of detected and suppressed errors, rerun with: -s ==25509== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)