==26091== Memcheck, a memory error detector ==26091== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26091== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26091== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==26091== Parent PID: 24162 ==26091== ==26091== ==26091== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26091== Open file descriptor 12: ==26091== at 0xFB640FD: pipe (pipe.c:29) ==26091== by 0x19A1D07D: ??? ==26091== by 0x12E644CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26091== by 0x1045C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26091== by 0x103F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26091== by 0x105E5D38: PetscInitialize (pinit.c:924) ==26091== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26091== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26091== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26091== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26091== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26091== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26091== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26091== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==26091== ==26091== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26091== at 0xFB68A9C: __open_nocancel (open64_nocancel.c:39) ==26091== by 0xFAECBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26091== by 0xF4A2822: ??? ==26091== by 0xF4A296F: ??? ==26091== by 0x12F096DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26091== by 0x12F09938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26091== by 0x12EBF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26091== by 0x12E642DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26091== by 0x1045C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26091== by 0x103F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26091== by 0x105E5D38: PetscInitialize (pinit.c:924) ==26091== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26091== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26091== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26091== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26091== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26091== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26091== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26091== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==26091== ==26091== Open file descriptor 145: ==26091== ==26091== ==26091== Open file descriptor 142: ==26091== ==26091== ==26091== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==26091== ==26091== ==26091== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26091== ==26091== ==26091== ==26091== HEAP SUMMARY: ==26091== in use at exit: 35,199 bytes in 290 blocks ==26091== total heap usage: 409,100 allocs, 408,810 frees, 23,098,486 bytes allocated ==26091== ==26091== LEAK SUMMARY: ==26091== definitely lost: 0 bytes in 0 blocks ==26091== indirectly lost: 0 bytes in 0 blocks ==26091== possibly lost: 0 bytes in 0 blocks ==26091== still reachable: 56 bytes in 3 blocks ==26091== suppressed: 35,143 bytes in 287 blocks ==26091== Reachable blocks (those to which a pointer was found) are not shown. ==26091== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26091== ==26091== For lists of detected and suppressed errors, rerun with: -s ==26091== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)