==26594== Memcheck, a memory error detector ==26594== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26594== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26594== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==26594== Parent PID: 24162 ==26594== ==26594== ==26594== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26594== Open file descriptor 12: ==26594== at 0xFC8F0FD: pipe (pipe.c:29) ==26594== by 0x19A1B07D: ??? ==26594== by 0x12E644CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26594== by 0x10587418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26594== by 0x10520D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26594== by 0x106CCD38: PetscInitialize (pinit.c:924) ==26594== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26594== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26594== by 0x3115B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26594== by 0x307B59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26594== by 0x30BF60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26594== by 0x30BE00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26594== by 0x30C497: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26594== by 0x305F75: main (TestOffLatticeSimulation.cpp:19) ==26594== ==26594== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26594== at 0xFC93A9C: __open_nocancel (open64_nocancel.c:39) ==26594== by 0xFC17BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26594== by 0xF4A2822: ??? ==26594== by 0xF4A296F: ??? ==26594== by 0x12F096DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26594== by 0x12F09938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26594== by 0x12EBF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26594== by 0x12E642DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26594== by 0x10587418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26594== by 0x10520D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26594== by 0x106CCD38: PetscInitialize (pinit.c:924) ==26594== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26594== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26594== by 0x3115B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26594== by 0x307B59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26594== by 0x30BF60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26594== by 0x30BE00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26594== by 0x30C497: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26594== by 0x305F75: main (TestOffLatticeSimulation.cpp:19) ==26594== ==26594== Open file descriptor 145: ==26594== ==26594== ==26594== Open file descriptor 142: ==26594== ==26594== ==26594== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==26594== ==26594== ==26594== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26594== ==26594== ==26594== ==26594== HEAP SUMMARY: ==26594== in use at exit: 35,126 bytes in 286 blocks ==26594== total heap usage: 12,078,061 allocs, 12,077,775 frees, 2,469,670,428 bytes allocated ==26594== ==26594== LEAK SUMMARY: ==26594== definitely lost: 0 bytes in 0 blocks ==26594== indirectly lost: 0 bytes in 0 blocks ==26594== possibly lost: 0 bytes in 0 blocks ==26594== still reachable: 56 bytes in 3 blocks ==26594== suppressed: 35,070 bytes in 283 blocks ==26594== Reachable blocks (those to which a pointer was found) are not shown. ==26594== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26594== ==26594== For lists of detected and suppressed errors, rerun with: -s ==26594== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)