==26231== Memcheck, a memory error detector ==26231== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26231== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26231== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26231== Parent PID: 24162 ==26231== ==26231== ==26231== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26231== Open file descriptor 12: ==26231== at 0xFC4B0FD: pipe (pipe.c:29) ==26231== by 0x19A1B07D: ??? ==26231== by 0x12E644CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26231== by 0x10545418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26231== by 0x104DED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26231== by 0x106CCD38: PetscInitialize (pinit.c:924) ==26231== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26231== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26231== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26231== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26231== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26231== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26231== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26231== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26231== ==26231== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26231== at 0xFC4FA9C: __open_nocancel (open64_nocancel.c:39) ==26231== by 0xFBD3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26231== by 0xF4A2822: ??? ==26231== by 0xF4A296F: ??? ==26231== by 0x12F096DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26231== by 0x12F09938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26231== by 0x12EBF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26231== by 0x12E642DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26231== by 0x10545418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26231== by 0x104DED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26231== by 0x106CCD38: PetscInitialize (pinit.c:924) ==26231== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26231== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26231== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26231== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26231== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26231== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26231== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26231== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26231== ==26231== Open file descriptor 145: ==26231== ==26231== ==26231== Open file descriptor 142: ==26231== ==26231== ==26231== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==26231== ==26231== ==26231== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26231== ==26231== ==26231== ==26231== HEAP SUMMARY: ==26231== in use at exit: 35,199 bytes in 290 blocks ==26231== total heap usage: 37,089 allocs, 36,799 frees, 7,832,346 bytes allocated ==26231== ==26231== LEAK SUMMARY: ==26231== definitely lost: 0 bytes in 0 blocks ==26231== indirectly lost: 0 bytes in 0 blocks ==26231== possibly lost: 0 bytes in 0 blocks ==26231== still reachable: 56 bytes in 3 blocks ==26231== suppressed: 35,143 bytes in 287 blocks ==26231== Reachable blocks (those to which a pointer was found) are not shown. ==26231== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26231== ==26231== For lists of detected and suppressed errors, rerun with: -s ==26231== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)