==40063== Memcheck, a memory error detector ==40063== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40063== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40063== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningContactInhibitionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40063== Parent PID: 24162 ==40063== ==40063== ==40063== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40063== Open file descriptor 12: ==40063== at 0x111020FD: pipe (pipe.c:29) ==40063== by 0x19A1B07D: ??? ==40063== by 0x14FCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40063== by 0x10C68418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40063== by 0x10C01D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40063== by 0xF8F8D38: PetscInitialize (pinit.c:924) ==40063== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40063== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40063== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40063== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40063== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40063== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40063== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40063== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==40063== ==40063== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40063== at 0x11106A9C: __open_nocancel (open64_nocancel.c:39) ==40063== by 0x1108ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40063== by 0xF4A2822: ??? ==40063== by 0xF4A296F: ??? ==40063== by 0x150726DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40063== by 0x15072938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40063== by 0x15028922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40063== by 0x14FCD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40063== by 0x10C68418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40063== by 0x10C01D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40063== by 0xF8F8D38: PetscInitialize (pinit.c:924) ==40063== by 0xF464E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40063== by 0xF464EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40063== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40063== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40063== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40063== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40063== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40063== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==40063== ==40063== Open file descriptor 145: ==40063== ==40063== ==40063== Open file descriptor 142: ==40063== ==40063== ==40063== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningContactInhibitionSimulationsTutorial_valgrind.txt ==40063== ==40063== ==40063== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40063== ==40063== ==40063== ==40063== HEAP SUMMARY: ==40063== in use at exit: 35,126 bytes in 286 blocks ==40063== total heap usage: 11,420,933 allocs, 11,420,647 frees, 3,447,941,717 bytes allocated ==40063== ==40063== LEAK SUMMARY: ==40063== definitely lost: 0 bytes in 0 blocks ==40063== indirectly lost: 0 bytes in 0 blocks ==40063== possibly lost: 0 bytes in 0 blocks ==40063== still reachable: 56 bytes in 3 blocks ==40063== suppressed: 35,070 bytes in 283 blocks ==40063== Reachable blocks (those to which a pointer was found) are not shown. ==40063== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40063== ==40063== For lists of detected and suppressed errors, rerun with: -s ==40063== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)