==40900== Memcheck, a memory error detector ==40900== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40900== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40900== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40900== Parent PID: 24162 ==40900== ==40900== ==40900== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40900== Open file descriptor 12: ==40900== at 0x129180FD: pipe (pipe.c:29) ==40900== by 0x1B71907D: ??? ==40900== by 0x168A44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40900== by 0x12220418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40900== by 0x121B9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40900== by 0x624DD38: PetscInitialize (pinit.c:924) ==40900== by 0x120DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40900== by 0x120DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40900== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40900== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40900== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40900== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40900== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40900== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==40900== ==40900== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40900== at 0x1291CA9C: __open_nocancel (open64_nocancel.c:39) ==40900== by 0x128A0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40900== by 0x1211D822: ??? ==40900== by 0x1211D96F: ??? ==40900== by 0x169496DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40900== by 0x16949938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40900== by 0x168FF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40900== by 0x168A42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40900== by 0x12220418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40900== by 0x121B9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40900== by 0x624DD38: PetscInitialize (pinit.c:924) ==40900== by 0x120DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40900== by 0x120DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40900== by 0x120E0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40900== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40900== by 0x11E8CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40900== by 0x11E7CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40900== by 0x11EDDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40900== by 0x11AE35: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==40900== ==40900== Open file descriptor 145: ==40900== ==40900== ==40900== Open file descriptor 142: ==40900== ==40900== ==40900== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==40900== ==40900== ==40900== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40900== ==40900== ==40900== ==40900== HEAP SUMMARY: ==40900== in use at exit: 35,215 bytes in 290 blocks ==40900== total heap usage: 1,739,713 allocs, 1,739,423 frees, 184,490,432 bytes allocated ==40900== ==40900== LEAK SUMMARY: ==40900== definitely lost: 0 bytes in 0 blocks ==40900== indirectly lost: 0 bytes in 0 blocks ==40900== possibly lost: 0 bytes in 0 blocks ==40900== still reachable: 56 bytes in 3 blocks ==40900== suppressed: 35,159 bytes in 287 blocks ==40900== Reachable blocks (those to which a pointer was found) are not shown. ==40900== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40900== ==40900== For lists of detected and suppressed errors, rerun with: -s ==40900== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)