==40452== Memcheck, a memory error detector ==40452== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40452== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40452== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==40452== Parent PID: 24281 ==40452== ==40452== ==40452== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40452== Open file descriptor 12: ==40452== at 0xF4750FD: pipe (pipe.c:29) ==40452== by 0x1B39307D: ??? ==40452== by 0x143C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40452== by 0x11AFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40452== by 0x11A95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40452== by 0x11C41D38: PetscInitialize (pinit.c:924) ==40452== by 0xED75E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40452== by 0xED75EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40452== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40452== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40452== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40452== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40452== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40452== by 0x118975: main (TestCellForCrypt.cpp:18) ==40452== ==40452== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40452== at 0xF479A9C: __open_nocancel (open64_nocancel.c:39) ==40452== by 0xF3FDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40452== by 0xEDB3822: ??? ==40452== by 0xEDB396F: ??? ==40452== by 0x1446D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40452== by 0x1446D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40452== by 0x14423922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40452== by 0x143C82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40452== by 0x11AFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40452== by 0x11A95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40452== by 0x11C41D38: PetscInitialize (pinit.c:924) ==40452== by 0xED75E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40452== by 0xED75EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40452== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40452== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40452== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40452== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40452== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40452== by 0x118975: main (TestCellForCrypt.cpp:18) ==40452== ==40452== Open file descriptor 145: ==40452== ==40452== ==40452== Open file descriptor 142: ==40452== ==40452== ==40452== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==40452== ==40452== ==40452== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40452== ==40452== ==40452== ==40452== HEAP SUMMARY: ==40452== in use at exit: 35,343 bytes in 291 blocks ==40452== total heap usage: 39,561 allocs, 39,270 frees, 8,113,000 bytes allocated ==40452== ==40452== LEAK SUMMARY: ==40452== definitely lost: 0 bytes in 0 blocks ==40452== indirectly lost: 0 bytes in 0 blocks ==40452== possibly lost: 0 bytes in 0 blocks ==40452== still reachable: 184 bytes in 4 blocks ==40452== suppressed: 35,159 bytes in 287 blocks ==40452== Reachable blocks (those to which a pointer was found) are not shown. ==40452== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40452== ==40452== For lists of detected and suppressed errors, rerun with: -s ==40452== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)