==25630== Memcheck, a memory error detector ==25630== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25630== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25630== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25630== Parent PID: 24240 ==25630== ==25630== ==25630== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25630== Open file descriptor 12: ==25630== at 0xF87B0FD: pipe (pipe.c:29) ==25630== by 0x1973307D: ??? ==25630== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25630== by 0x10173418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25630== by 0x1010CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25630== by 0x102FCD38: PetscInitialize (pinit.c:924) ==25630== by 0xF17BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25630== by 0xF17BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25630== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25630== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25630== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25630== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25630== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25630== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25630== ==25630== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25630== at 0xF87FA9C: __open_nocancel (open64_nocancel.c:39) ==25630== by 0xF803BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25630== by 0xF1B9822: ??? ==25630== by 0xF1B996F: ??? ==25630== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25630== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25630== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25630== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25630== by 0x10173418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25630== by 0x1010CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25630== by 0x102FCD38: PetscInitialize (pinit.c:924) ==25630== by 0xF17BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25630== by 0xF17BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25630== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25630== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25630== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25630== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25630== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25630== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25630== ==25630== Open file descriptor 145: ==25630== ==25630== ==25630== Open file descriptor 142: ==25630== ==25630== ==25630== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25630== ==25630== ==25630== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25630== ==25630== ==25630== ==25630== HEAP SUMMARY: ==25630== in use at exit: 35,263 bytes in 291 blocks ==25630== total heap usage: 53,204 allocs, 52,913 frees, 9,611,583 bytes allocated ==25630== ==25630== LEAK SUMMARY: ==25630== definitely lost: 0 bytes in 0 blocks ==25630== indirectly lost: 0 bytes in 0 blocks ==25630== possibly lost: 0 bytes in 0 blocks ==25630== still reachable: 120 bytes in 4 blocks ==25630== suppressed: 35,143 bytes in 287 blocks ==25630== Reachable blocks (those to which a pointer was found) are not shown. ==25630== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25630== ==25630== For lists of detected and suppressed errors, rerun with: -s ==25630== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)