==26217== Memcheck, a memory error detector ==26217== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26217== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26217== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==26217== Parent PID: 24240 ==26217== ==26217== ==26217== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26217== Open file descriptor 12: ==26217== at 0xF9A60FD: pipe (pipe.c:29) ==26217== by 0x1973307D: ??? ==26217== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26217== by 0x1029E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26217== by 0x10237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26217== by 0x103E3D38: PetscInitialize (pinit.c:924) ==26217== by 0xF17BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26217== by 0xF17BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26217== by 0x2E2C5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26217== by 0x2D9459: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26217== by 0x2DDE24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26217== by 0x2DDCC4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26217== by 0x2DE35B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26217== by 0x2D7875: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26217== ==26217== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26217== at 0xF9AAA9C: __open_nocancel (open64_nocancel.c:39) ==26217== by 0xF92EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26217== by 0xF1B9822: ??? ==26217== by 0xF1B996F: ??? ==26217== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26217== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26217== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26217== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26217== by 0x1029E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26217== by 0x10237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26217== by 0x103E3D38: PetscInitialize (pinit.c:924) ==26217== by 0xF17BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26217== by 0xF17BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26217== by 0x2E2C5E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26217== by 0x2D9459: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26217== by 0x2DDE24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26217== by 0x2DDCC4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26217== by 0x2DE35B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26217== by 0x2D7875: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26217== ==26217== Open file descriptor 145: ==26217== ==26217== ==26217== Open file descriptor 142: ==26217== ==26217== ==26217== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==26217== ==26217== ==26217== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26217== ==26217== ==26217== ==26217== HEAP SUMMARY: ==26217== in use at exit: 35,199 bytes in 290 blocks ==26217== total heap usage: 95,700 allocs, 95,410 frees, 15,546,519 bytes allocated ==26217== ==26217== LEAK SUMMARY: ==26217== definitely lost: 0 bytes in 0 blocks ==26217== indirectly lost: 0 bytes in 0 blocks ==26217== possibly lost: 0 bytes in 0 blocks ==26217== still reachable: 56 bytes in 3 blocks ==26217== suppressed: 35,143 bytes in 287 blocks ==26217== Reachable blocks (those to which a pointer was found) are not shown. ==26217== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26217== ==26217== For lists of detected and suppressed errors, rerun with: -s ==26217== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)