==26247== Memcheck, a memory error detector ==26247== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26247== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26247== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26247== Parent PID: 24240 ==26247== ==26247== ==26247== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26247== Open file descriptor 12: ==26247== at 0xF10D0FD: pipe (pipe.c:29) ==26247== by 0x1973207D: ??? ==26247== by 0x13CCF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26247== by 0xED5A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26247== by 0xECF3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26247== by 0xD9EAD38: PetscInitialize (pinit.c:924) ==26247== by 0xD512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26247== by 0xD512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26247== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26247== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26247== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26247== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26247== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26247== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26247== ==26247== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26247== at 0xF111A9C: __open_nocancel (open64_nocancel.c:39) ==26247== by 0xF095BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26247== by 0xD550822: ??? ==26247== by 0xD55096F: ??? ==26247== by 0x13D746DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26247== by 0x13D74938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26247== by 0x13D2A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26247== by 0x13CCF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26247== by 0xED5A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26247== by 0xECF3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26247== by 0xD9EAD38: PetscInitialize (pinit.c:924) ==26247== by 0xD512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26247== by 0xD512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26247== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26247== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26247== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26247== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26247== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26247== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26247== ==26247== Open file descriptor 145: ==26247== ==26247== ==26247== Open file descriptor 142: ==26247== ==26247== ==26247== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26247== ==26247== ==26247== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26247== ==26247== ==26247== ==26247== HEAP SUMMARY: ==26247== in use at exit: 35,199 bytes in 290 blocks ==26247== total heap usage: 51,319 allocs, 51,029 frees, 8,897,469 bytes allocated ==26247== ==26247== LEAK SUMMARY: ==26247== definitely lost: 0 bytes in 0 blocks ==26247== indirectly lost: 0 bytes in 0 blocks ==26247== possibly lost: 0 bytes in 0 blocks ==26247== still reachable: 56 bytes in 3 blocks ==26247== suppressed: 35,143 bytes in 287 blocks ==26247== Reachable blocks (those to which a pointer was found) are not shown. ==26247== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26247== ==26247== For lists of detected and suppressed errors, rerun with: -s ==26247== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)