==25667== Memcheck, a memory error detector ==25667== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25667== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25667== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedParabolicPdes -malloc_debug -malloc_dump -memory_info ==25667== Parent PID: 24181 ==25667== ==25667== ==25667== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25667== Open file descriptor 12: ==25667== at 0x110E50FD: pipe (pipe.c:29) ==25667== by 0x199BC07D: ??? ==25667== by 0x14F6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25667== by 0x10C4B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0x10BE4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0xF8DBD38: PetscInitialize (pinit.c:924) ==25667== by 0xF405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25667== by 0xF405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25667== by 0x12E523: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25667== by 0x12929D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25667== by 0x12BE20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25667== by 0x12BCC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25667== by 0x12C357: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25667== by 0x1276C5: main (TestCellBasedParabolicPdes.cpp:19) ==25667== ==25667== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25667== at 0x110E9A9C: __open_nocancel (open64_nocancel.c:39) ==25667== by 0x1106DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25667== by 0xF443822: ??? ==25667== by 0xF44396F: ??? ==25667== by 0x150136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25667== by 0x15013938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25667== by 0x14FC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25667== by 0x14F6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25667== by 0x10C4B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0x10BE4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25667== by 0xF8DBD38: PetscInitialize (pinit.c:924) ==25667== by 0xF405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25667== by 0xF405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25667== by 0x12E523: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25667== by 0x12929D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25667== by 0x12BE20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25667== by 0x12BCC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25667== by 0x12C357: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25667== by 0x1276C5: main (TestCellBasedParabolicPdes.cpp:19) ==25667== ==25667== Open file descriptor 145: ==25667== ==25667== ==25667== Open file descriptor 142: ==25667== ==25667== ==25667== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedParabolicPdes_valgrind.txt ==25667== ==25667== ==25667== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25667== ==25667== ==25667== ==25667== HEAP SUMMARY: ==25667== in use at exit: 35,199 bytes in 290 blocks ==25667== total heap usage: 58,109 allocs, 57,819 frees, 11,612,701 bytes allocated ==25667== ==25667== LEAK SUMMARY: ==25667== definitely lost: 0 bytes in 0 blocks ==25667== indirectly lost: 0 bytes in 0 blocks ==25667== possibly lost: 0 bytes in 0 blocks ==25667== still reachable: 56 bytes in 3 blocks ==25667== suppressed: 35,143 bytes in 287 blocks ==25667== Reachable blocks (those to which a pointer was found) are not shown. ==25667== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25667== ==25667== For lists of detected and suppressed errors, rerun with: -s ==25667== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)