==25552== Memcheck, a memory error detector ==25552== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25552== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25552== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25552== Parent PID: 24181 ==25552== ==25552== ==25552== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25552== Open file descriptor 12: ==25552== at 0xF2970FD: pipe (pipe.c:29) ==25552== by 0x199BC07D: ??? ==25552== by 0x13F5D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25552== by 0xEEE4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25552== by 0xEE7DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25552== by 0xDB74D38: PetscInitialize (pinit.c:924) ==25552== by 0xD9E3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25552== by 0xD9E3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25552== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25552== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25552== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25552== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25552== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25552== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25552== ==25552== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25552== at 0xF29BA9C: __open_nocancel (open64_nocancel.c:39) ==25552== by 0xF21FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25552== by 0xDA21822: ??? ==25552== by 0xDA2196F: ??? ==25552== by 0x140026DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25552== by 0x14002938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25552== by 0x13FB8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25552== by 0x13F5D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25552== by 0xEEE4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25552== by 0xEE7DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25552== by 0xDB74D38: PetscInitialize (pinit.c:924) ==25552== by 0xD9E3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25552== by 0xD9E3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25552== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25552== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25552== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25552== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25552== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25552== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25552== ==25552== Open file descriptor 145: ==25552== ==25552== ==25552== Open file descriptor 142: ==25552== ==25552== ==25552== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25552== ==25552== ==25552== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25552== ==25552== ==25552== ==25552== HEAP SUMMARY: ==25552== in use at exit: 35,199 bytes in 290 blocks ==25552== total heap usage: 531,415 allocs, 531,125 frees, 13,689,274 bytes allocated ==25552== ==25552== LEAK SUMMARY: ==25552== definitely lost: 0 bytes in 0 blocks ==25552== indirectly lost: 0 bytes in 0 blocks ==25552== possibly lost: 0 bytes in 0 blocks ==25552== still reachable: 56 bytes in 3 blocks ==25552== suppressed: 35,143 bytes in 287 blocks ==25552== Reachable blocks (those to which a pointer was found) are not shown. ==25552== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25552== ==25552== For lists of detected and suppressed errors, rerun with: -s ==25552== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)