==42558== Memcheck, a memory error detector ==42558== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42558== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42558== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==42558== Parent PID: 24914 ==42558== ==42558== ==42558== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42558== Open file descriptor 12: ==42558== at 0x87D60FD: pipe (pipe.c:29) ==42558== by 0x1435907D: ??? ==42558== by 0xC8CF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42558== by 0x8BA4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42558== by 0x8B3DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42558== by 0x907FD38: PetscInitialize (pinit.c:924) ==42558== by 0x8401E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42558== by 0x8401EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42558== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42558== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42558== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42558== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42558== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42558== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42558== ==42558== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42558== at 0x87DAA9C: __open_nocancel (open64_nocancel.c:39) ==42558== by 0x875EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42558== by 0x843F822: ??? ==42558== by 0x843F96F: ??? ==42558== by 0xC9746DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42558== by 0xC974938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42558== by 0xC92A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42558== by 0xC8CF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42558== by 0x8BA4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42558== by 0x8B3DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42558== by 0x907FD38: PetscInitialize (pinit.c:924) ==42558== by 0x8401E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42558== by 0x8401EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42558== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42558== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42558== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42558== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42558== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42558== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42558== ==42558== Open file descriptor 145: ==42558== ==42558== ==42558== Open file descriptor 142: ==42558== ==42558== ==42558== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==42558== ==42558== ==42558== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42558== ==42558== ==42558== ==42558== HEAP SUMMARY: ==42558== in use at exit: 38,715 bytes in 293 blocks ==42558== total heap usage: 3,038,036 allocs, 3,037,743 frees, 281,634,851 bytes allocated ==42558== ==42558== LEAK SUMMARY: ==42558== definitely lost: 0 bytes in 0 blocks ==42558== indirectly lost: 0 bytes in 0 blocks ==42558== possibly lost: 0 bytes in 0 blocks ==42558== still reachable: 3,629 bytes in 10 blocks ==42558== suppressed: 35,086 bytes in 283 blocks ==42558== Reachable blocks (those to which a pointer was found) are not shown. ==42558== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42558== ==42558== For lists of detected and suppressed errors, rerun with: -s ==42558== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)