==26935== Memcheck, a memory error detector ==26935== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26935== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26935== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26935== Parent PID: 24914 ==26935== ==26935== ==26935== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26935== Open file descriptor 12: ==26935== at 0xFC300FD: pipe (pipe.c:29) ==26935== by 0x199BE07D: ??? ==26935== by 0x12E324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26935== by 0x10528418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26935== by 0x104C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26935== by 0x1066DD38: PetscInitialize (pinit.c:924) ==26935== by 0xF405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26935== by 0xF405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26935== by 0x2F3BC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26935== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26935== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26935== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26935== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26935== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26935== ==26935== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26935== at 0xFC34A9C: __open_nocancel (open64_nocancel.c:39) ==26935== by 0xFBB8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26935== by 0xF443822: ??? ==26935== by 0xF44396F: ??? ==26935== by 0x12ED76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26935== by 0x12ED7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26935== by 0x12E8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26935== by 0x12E322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26935== by 0x10528418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26935== by 0x104C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26935== by 0x1066DD38: PetscInitialize (pinit.c:924) ==26935== by 0xF405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26935== by 0xF405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26935== by 0x2F3BC4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26935== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26935== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26935== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26935== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26935== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26935== ==26935== Open file descriptor 145: ==26935== ==26935== ==26935== Open file descriptor 142: ==26935== ==26935== ==26935== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==26935== ==26935== ==26935== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26935== ==26935== ==26935== ==26935== HEAP SUMMARY: ==26935== in use at exit: 35,199 bytes in 290 blocks ==26935== total heap usage: 131,958 allocs, 131,668 frees, 35,884,488 bytes allocated ==26935== ==26935== LEAK SUMMARY: ==26935== definitely lost: 0 bytes in 0 blocks ==26935== indirectly lost: 0 bytes in 0 blocks ==26935== possibly lost: 0 bytes in 0 blocks ==26935== still reachable: 56 bytes in 3 blocks ==26935== suppressed: 35,143 bytes in 287 blocks ==26935== Reachable blocks (those to which a pointer was found) are not shown. ==26935== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26935== ==26935== For lists of detected and suppressed errors, rerun with: -s ==26935== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)