==26992== Memcheck, a memory error detector ==26992== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26992== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26992== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==26992== Parent PID: 24914 ==26992== ==26992== ==26992== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26992== Open file descriptor 12: ==26992== at 0xFC300FD: pipe (pipe.c:29) ==26992== by 0x199BE07D: ??? ==26992== by 0x12E324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26992== by 0x10528418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26992== by 0x104C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26992== by 0x1066DD38: PetscInitialize (pinit.c:924) ==26992== by 0xF405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26992== by 0xF405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26992== by 0x2E1B32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26992== by 0x2D8459: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26992== by 0x2DCE24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26992== by 0x2DCCC4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26992== by 0x2DD35B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26992== by 0x2D6875: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26992== ==26992== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26992== at 0xFC34A9C: __open_nocancel (open64_nocancel.c:39) ==26992== by 0xFBB8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26992== by 0xF443822: ??? ==26992== by 0xF44396F: ??? ==26992== by 0x12ED76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26992== by 0x12ED7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26992== by 0x12E8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26992== by 0x12E322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26992== by 0x10528418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26992== by 0x104C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26992== by 0x1066DD38: PetscInitialize (pinit.c:924) ==26992== by 0xF405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26992== by 0xF405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26992== by 0x2E1B32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26992== by 0x2D8459: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26992== by 0x2DCE24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26992== by 0x2DCCC4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26992== by 0x2DD35B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26992== by 0x2D6875: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26992== ==26992== Open file descriptor 145: ==26992== ==26992== ==26992== Open file descriptor 142: ==26992== ==26992== ==26992== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==26992== ==26992== ==26992== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26992== ==26992== ==26992== ==26992== HEAP SUMMARY: ==26992== in use at exit: 35,199 bytes in 290 blocks ==26992== total heap usage: 95,918 allocs, 95,628 frees, 15,561,967 bytes allocated ==26992== ==26992== LEAK SUMMARY: ==26992== definitely lost: 0 bytes in 0 blocks ==26992== indirectly lost: 0 bytes in 0 blocks ==26992== possibly lost: 0 bytes in 0 blocks ==26992== still reachable: 56 bytes in 3 blocks ==26992== suppressed: 35,143 bytes in 287 blocks ==26992== Reachable blocks (those to which a pointer was found) are not shown. ==26992== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26992== ==26992== For lists of detected and suppressed errors, rerun with: -s ==26992== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)