==41327== Memcheck, a memory error detector ==41327== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41327== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41327== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==41327== Parent PID: 24914 ==41327== ==41327== ==41327== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41327== Open file descriptor 12: ==41327== at 0x129A00FD: pipe (pipe.c:29) ==41327== by 0x1B6BA07D: ??? ==41327== by 0x168724CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41327== by 0x121C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41327== by 0x1215AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41327== by 0x624DD38: PetscInitialize (pinit.c:924) ==41327== by 0x12080E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41327== by 0x12080EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41327== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41327== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41327== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41327== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41327== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41327== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41327== ==41327== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41327== at 0x129A4A9C: __open_nocancel (open64_nocancel.c:39) ==41327== by 0x12928BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41327== by 0x120BE822: ??? ==41327== by 0x120BE96F: ??? ==41327== by 0x169176DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41327== by 0x16917938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41327== by 0x168CD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41327== by 0x168722DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41327== by 0x121C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41327== by 0x1215AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41327== by 0x624DD38: PetscInitialize (pinit.c:924) ==41327== by 0x12080E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41327== by 0x12080EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41327== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41327== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41327== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41327== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41327== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41327== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41327== ==41327== Open file descriptor 145: ==41327== ==41327== ==41327== Open file descriptor 142: ==41327== ==41327== ==41327== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==41327== ==41327== ==41327== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41327== ==41327== ==41327== ==41327== HEAP SUMMARY: ==41327== in use at exit: 35,215 bytes in 290 blocks ==41327== total heap usage: 1,389,523 allocs, 1,389,233 frees, 124,386,742 bytes allocated ==41327== ==41327== LEAK SUMMARY: ==41327== definitely lost: 0 bytes in 0 blocks ==41327== indirectly lost: 0 bytes in 0 blocks ==41327== possibly lost: 0 bytes in 0 blocks ==41327== still reachable: 56 bytes in 3 blocks ==41327== suppressed: 35,159 bytes in 287 blocks ==41327== Reachable blocks (those to which a pointer was found) are not shown. ==41327== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41327== ==41327== For lists of detected and suppressed errors, rerun with: -s ==41327== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)