==41852== Memcheck, a memory error detector ==41852== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41852== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41852== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==41852== Parent PID: 24914 ==41852== ==41852== ==41852== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41852== Open file descriptor 12: ==41852== at 0x128B90FD: pipe (pipe.c:29) ==41852== by 0x1B6BA07D: ??? ==41852== by 0x168724CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41852== by 0x121C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41852== by 0x1215AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41852== by 0x624DD38: PetscInitialize (pinit.c:924) ==41852== by 0x12080E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41852== by 0x12080EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41852== by 0x11FDA3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41852== by 0x11B613: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41852== by 0x11D8AE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41852== by 0x11D7AA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41852== by 0x11DDBD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41852== by 0x119E15: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==41852== ==41852== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41852== at 0x128BDA9C: __open_nocancel (open64_nocancel.c:39) ==41852== by 0x12841BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41852== by 0x120BE822: ??? ==41852== by 0x120BE96F: ??? ==41852== by 0x169176DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41852== by 0x16917938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41852== by 0x168CD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41852== by 0x168722DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41852== by 0x121C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41852== by 0x1215AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41852== by 0x624DD38: PetscInitialize (pinit.c:924) ==41852== by 0x12080E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41852== by 0x12080EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41852== by 0x11FDA3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41852== by 0x11B613: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41852== by 0x11D8AE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41852== by 0x11D7AA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41852== by 0x11DDBD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41852== by 0x119E15: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==41852== ==41852== Open file descriptor 145: ==41852== ==41852== ==41852== Open file descriptor 142: ==41852== ==41852== ==41852== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==41852== ==41852== ==41852== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41852== ==41852== ==41852== ==41852== HEAP SUMMARY: ==41852== in use at exit: 35,295 bytes in 291 blocks ==41852== total heap usage: 1,601,697 allocs, 1,601,406 frees, 127,298,700 bytes allocated ==41852== ==41852== LEAK SUMMARY: ==41852== definitely lost: 0 bytes in 0 blocks ==41852== indirectly lost: 0 bytes in 0 blocks ==41852== possibly lost: 0 bytes in 0 blocks ==41852== still reachable: 136 bytes in 4 blocks ==41852== suppressed: 35,159 bytes in 287 blocks ==41852== Reachable blocks (those to which a pointer was found) are not shown. ==41852== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41852== ==41852== For lists of detected and suppressed errors, rerun with: -s ==41852== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)