==41261== Memcheck, a memory error detector ==41261== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41261== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41261== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==41261== Parent PID: 24914 ==41261== ==41261== ==41261== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41261== Open file descriptor 12: ==41261== at 0x10B940FD: pipe (pipe.c:29) ==41261== by 0x1B6B907D: ??? ==41261== by 0x1585A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41261== by 0x107E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41261== by 0x1077AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41261== by 0x62B4D38: PetscInitialize (pinit.c:924) ==41261== by 0x106C3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41261== by 0x106C3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41261== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41261== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41261== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41261== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41261== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41261== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==41261== ==41261== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41261== at 0x10B98A9C: __open_nocancel (open64_nocancel.c:39) ==41261== by 0x10B1CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41261== by 0x615F822: ??? ==41261== by 0x615F96F: ??? ==41261== by 0x158FF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41261== by 0x158FF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41261== by 0x158B5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41261== by 0x1585A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41261== by 0x107E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41261== by 0x1077AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41261== by 0x62B4D38: PetscInitialize (pinit.c:924) ==41261== by 0x106C3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41261== by 0x106C3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41261== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41261== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41261== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41261== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41261== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41261== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==41261== ==41261== Open file descriptor 145: ==41261== ==41261== ==41261== Open file descriptor 142: ==41261== ==41261== ==41261== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==41261== ==41261== ==41261== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41261== ==41261== ==41261== ==41261== HEAP SUMMARY: ==41261== in use at exit: 35,183 bytes in 289 blocks ==41261== total heap usage: 169,602 allocs, 169,313 frees, 88,854,883 bytes allocated ==41261== ==41261== LEAK SUMMARY: ==41261== definitely lost: 0 bytes in 0 blocks ==41261== indirectly lost: 0 bytes in 0 blocks ==41261== possibly lost: 0 bytes in 0 blocks ==41261== still reachable: 24 bytes in 2 blocks ==41261== suppressed: 35,159 bytes in 287 blocks ==41261== Reachable blocks (those to which a pointer was found) are not shown. ==41261== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41261== ==41261== For lists of detected and suppressed errors, rerun with: -s ==41261== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)