==25868== Memcheck, a memory error detector ==25868== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25868== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25868== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25868== Parent PID: 24528 ==25868== ==25868== ==25868== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25868== Open file descriptor 12: ==25868== at 0xF0A00FD: pipe (pipe.c:29) ==25868== by 0x197C507D: ??? ==25868== by 0x13D664CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25868== by 0xECED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25868== by 0xEC86D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25868== by 0xD97DD38: PetscInitialize (pinit.c:924) ==25868== by 0xD7ECE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25868== by 0xD7ECEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25868== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25868== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25868== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25868== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25868== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25868== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25868== ==25868== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25868== at 0xF0A4A9C: __open_nocancel (open64_nocancel.c:39) ==25868== by 0xF028BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25868== by 0xD82A822: ??? ==25868== by 0xD82A96F: ??? ==25868== by 0x13E0B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25868== by 0x13E0B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25868== by 0x13DC1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25868== by 0x13D662DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25868== by 0xECED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25868== by 0xEC86D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25868== by 0xD97DD38: PetscInitialize (pinit.c:924) ==25868== by 0xD7ECE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25868== by 0xD7ECEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25868== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25868== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25868== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25868== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25868== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25868== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25868== ==25868== Open file descriptor 145: ==25868== ==25868== ==25868== Open file descriptor 142: ==25868== ==25868== ==25868== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25868== ==25868== ==25868== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25868== ==25868== ==25868== ==25868== HEAP SUMMARY: ==25868== in use at exit: 35,199 bytes in 290 blocks ==25868== total heap usage: 531,233 allocs, 530,943 frees, 13,677,020 bytes allocated ==25868== ==25868== LEAK SUMMARY: ==25868== definitely lost: 0 bytes in 0 blocks ==25868== indirectly lost: 0 bytes in 0 blocks ==25868== possibly lost: 0 bytes in 0 blocks ==25868== still reachable: 56 bytes in 3 blocks ==25868== suppressed: 35,143 bytes in 287 blocks ==25868== Reachable blocks (those to which a pointer was found) are not shown. ==25868== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25868== ==25868== For lists of detected and suppressed errors, rerun with: -s ==25868== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)