==27745== Memcheck, a memory error detector ==27745== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27745== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27745== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==27745== Parent PID: 24528 ==27745== ==27745== ==27745== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27745== Open file descriptor 12: ==27745== at 0x10EEE0FD: pipe (pipe.c:29) ==27745== by 0x197C407D: ??? ==27745== by 0x14D814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27745== by 0x10A54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27745== by 0x109EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27745== by 0xF6E4D38: PetscInitialize (pinit.c:924) ==27745== by 0xF20EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27745== by 0xF20EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27745== by 0x1FFF4F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27745== by 0x1F9AF9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27745== by 0x1FD464: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27745== by 0x1FD304: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27745== by 0x1FD99B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27745== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==27745== ==27745== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27745== at 0x10EF2A9C: __open_nocancel (open64_nocancel.c:39) ==27745== by 0x10E76BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27745== by 0xF24C822: ??? ==27745== by 0xF24C96F: ??? ==27745== by 0x14E266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27745== by 0x14E26938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27745== by 0x14DDC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27745== by 0x14D812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27745== by 0x10A54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27745== by 0x109EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27745== by 0xF6E4D38: PetscInitialize (pinit.c:924) ==27745== by 0xF20EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27745== by 0xF20EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27745== by 0x1FFF4F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27745== by 0x1F9AF9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27745== by 0x1FD464: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27745== by 0x1FD304: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27745== by 0x1FD99B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27745== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==27745== ==27745== Open file descriptor 145: ==27745== ==27745== ==27745== Open file descriptor 142: ==27745== ==27745== ==27745== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==27745== ==27745== ==27745== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27745== ==27745== ==27745== ==27745== HEAP SUMMARY: ==27745== in use at exit: 35,126 bytes in 286 blocks ==27745== total heap usage: 9,796,296 allocs, 9,796,010 frees, 1,271,368,623 bytes allocated ==27745== ==27745== LEAK SUMMARY: ==27745== definitely lost: 0 bytes in 0 blocks ==27745== indirectly lost: 0 bytes in 0 blocks ==27745== possibly lost: 0 bytes in 0 blocks ==27745== still reachable: 56 bytes in 3 blocks ==27745== suppressed: 35,070 bytes in 283 blocks ==27745== Reachable blocks (those to which a pointer was found) are not shown. ==27745== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27745== ==27745== For lists of detected and suppressed errors, rerun with: -s ==27745== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)