==40827== Memcheck, a memory error detector ==40827== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40827== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40827== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==40827== Parent PID: 24528 ==40827== ==40827== ==40827== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40827== Open file descriptor 12: ==40827== at 0x10A630FD: pipe (pipe.c:29) ==40827== by 0x1B48507D: ??? ==40827== by 0x155D54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40827== by 0x1036B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0x10304D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0x6277D38: PetscInitialize (pinit.c:924) ==40827== by 0x1024DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40827== by 0x1024DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40827== by 0x18B9F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40827== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40827== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40827== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40827== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40827== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==40827== ==40827== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40827== at 0x10A67A9C: __open_nocancel (open64_nocancel.c:39) ==40827== by 0x109EBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40827== by 0x6122822: ??? ==40827== by 0x612296F: ??? ==40827== by 0x1567A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40827== by 0x1567A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40827== by 0x15630922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40827== by 0x155D52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40827== by 0x1036B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0x10304D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0x6277D38: PetscInitialize (pinit.c:924) ==40827== by 0x1024DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40827== by 0x1024DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40827== by 0x18B9F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40827== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40827== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40827== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40827== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40827== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==40827== ==40827== Open file descriptor 145: ==40827== ==40827== ==40827== Open file descriptor 142: ==40827== ==40827== ==40827== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==40827== ==40827== ==40827== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40827== ==40827== ==40827== ==40827== HEAP SUMMARY: ==40827== in use at exit: 35,359 bytes in 292 blocks ==40827== total heap usage: 246,922 allocs, 246,630 frees, 26,211,562 bytes allocated ==40827== ==40827== LEAK SUMMARY: ==40827== definitely lost: 0 bytes in 0 blocks ==40827== indirectly lost: 0 bytes in 0 blocks ==40827== possibly lost: 0 bytes in 0 blocks ==40827== still reachable: 200 bytes in 5 blocks ==40827== suppressed: 35,159 bytes in 287 blocks ==40827== Reachable blocks (those to which a pointer was found) are not shown. ==40827== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40827== ==40827== For lists of detected and suppressed errors, rerun with: -s ==40827== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)