==41644== Memcheck, a memory error detector ==41644== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41644== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41644== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainTissue -malloc_debug -malloc_dump -memory_info ==41644== Parent PID: 24629 ==41644== ==41644== ==41644== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41644== Open file descriptor 12: ==41644== at 0xBBD00FD: pipe (pipe.c:29) ==41644== by 0x1435807D: ??? ==41644== by 0xFB6B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41644== by 0xBF9E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41644== by 0xBF37D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41644== by 0x826CD38: PetscInitialize (pinit.c:924) ==41644== by 0xB4D7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41644== by 0xB4D7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41644== by 0x13BBAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41644== by 0x136263: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41644== by 0x138A3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41644== by 0x138936: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41644== by 0x138F49: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41644== by 0x134A65: main (TestExtendedBidomainTissue.cpp:18) ==41644== ==41644== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41644== at 0xBBD4A9C: __open_nocancel (open64_nocancel.c:39) ==41644== by 0xBB58BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41644== by 0x8117822: ??? ==41644== by 0x811796F: ??? ==41644== by 0xFC106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41644== by 0xFC10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41644== by 0xFBC6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41644== by 0xFB6B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41644== by 0xBF9E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41644== by 0xBF37D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41644== by 0x826CD38: PetscInitialize (pinit.c:924) ==41644== by 0xB4D7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41644== by 0xB4D7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41644== by 0x13BBAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41644== by 0x136263: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41644== by 0x138A3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41644== by 0x138936: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41644== by 0x138F49: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41644== by 0x134A65: main (TestExtendedBidomainTissue.cpp:18) ==41644== ==41644== Open file descriptor 145: ==41644== ==41644== ==41644== Open file descriptor 142: ==41644== ==41644== ==41644== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainTissue_valgrind.txt ==41644== ==41644== ==41644== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41644== ==41644== ==41644== ==41644== HEAP SUMMARY: ==41644== in use at exit: 35,183 bytes in 289 blocks ==41644== total heap usage: 104,750 allocs, 104,461 frees, 23,264,341 bytes allocated ==41644== ==41644== LEAK SUMMARY: ==41644== definitely lost: 0 bytes in 0 blocks ==41644== indirectly lost: 0 bytes in 0 blocks ==41644== possibly lost: 0 bytes in 0 blocks ==41644== still reachable: 24 bytes in 2 blocks ==41644== suppressed: 35,159 bytes in 287 blocks ==41644== Reachable blocks (those to which a pointer was found) are not shown. ==41644== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41644== ==41644== For lists of detected and suppressed errors, rerun with: -s ==41644== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)