==25859== Memcheck, a memory error detector ==25859== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25859== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25859== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==25859== Parent PID: 24047 ==25859== ==25859== ==25859== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25859== Open file descriptor 12: ==25859== at 0xF85C0FD: pipe (pipe.c:29) ==25859== by 0x196D007D: ??? ==25859== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25859== by 0x10156418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25859== by 0x100EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25859== by 0x1029BD38: PetscInitialize (pinit.c:924) ==25859== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25859== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25859== by 0x165480: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25859== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25859== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25859== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25859== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25859== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==25859== ==25859== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25859== at 0xF860A9C: __open_nocancel (open64_nocancel.c:39) ==25859== by 0xF7E4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25859== by 0xF158822: ??? ==25859== by 0xF15896F: ??? ==25859== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25859== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25859== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25859== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25859== by 0x10156418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25859== by 0x100EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25859== by 0x1029BD38: PetscInitialize (pinit.c:924) ==25859== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25859== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25859== by 0x165480: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25859== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25859== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25859== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25859== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25859== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==25859== ==25859== Open file descriptor 145: ==25859== ==25859== ==25859== Open file descriptor 142: ==25859== ==25859== ==25859== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==25859== ==25859== ==25859== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25859== ==25859== ==25859== ==25859== HEAP SUMMARY: ==25859== in use at exit: 36,669 bytes in 311 blocks ==25859== total heap usage: 59,615 allocs, 59,304 frees, 16,329,826 bytes allocated ==25859== ==25859== LEAK SUMMARY: ==25859== definitely lost: 0 bytes in 0 blocks ==25859== indirectly lost: 0 bytes in 0 blocks ==25859== possibly lost: 0 bytes in 0 blocks ==25859== still reachable: 56 bytes in 3 blocks ==25859== suppressed: 36,613 bytes in 308 blocks ==25859== Reachable blocks (those to which a pointer was found) are not shown. ==25859== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25859== ==25859== For lists of detected and suppressed errors, rerun with: -s ==25859== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)