==41463== Memcheck, a memory error detector ==41463== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41463== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41463== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41463== Parent PID: 24327 ==41463== ==41463== ==41463== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41463== Open file descriptor 12: ==41463== at 0xC1190FD: pipe (pipe.c:29) ==41463== by 0x1435807D: ??? ==41463== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41463== by 0xBA21418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41463== by 0xB9BAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41463== by 0x826CD38: PetscInitialize (pinit.c:924) ==41463== by 0xB8E9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41463== by 0xB8E9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41463== by 0x140858: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41463== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41463== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41463== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41463== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41463== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41463== ==41463== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41463== at 0xC11DA9C: __open_nocancel (open64_nocancel.c:39) ==41463== by 0xC0A1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41463== by 0x8117822: ??? ==41463== by 0x811796F: ??? ==41463== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41463== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41463== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41463== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41463== by 0xBA21418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41463== by 0xB9BAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41463== by 0x826CD38: PetscInitialize (pinit.c:924) ==41463== by 0xB8E9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41463== by 0xB8E9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41463== by 0x140858: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41463== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41463== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41463== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41463== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41463== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41463== ==41463== Open file descriptor 145: ==41463== ==41463== ==41463== Open file descriptor 142: ==41463== ==41463== ==41463== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41463== ==41463== ==41463== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41463== ==41463== ==41463== ==41463== HEAP SUMMARY: ==41463== in use at exit: 35,663 bytes in 299 blocks ==41463== total heap usage: 568,749 allocs, 568,450 frees, 217,899,799 bytes allocated ==41463== ==41463== LEAK SUMMARY: ==41463== definitely lost: 0 bytes in 0 blocks ==41463== indirectly lost: 0 bytes in 0 blocks ==41463== possibly lost: 0 bytes in 0 blocks ==41463== still reachable: 24 bytes in 2 blocks ==41463== suppressed: 35,639 bytes in 297 blocks ==41463== Reachable blocks (those to which a pointer was found) are not shown. ==41463== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41463== ==41463== For lists of detected and suppressed errors, rerun with: -s ==41463== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)