==26317== Memcheck, a memory error detector ==26317== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26317== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26317== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26317== Parent PID: 24327 ==26317== ==26317== ==26317== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26317== Open file descriptor 12: ==26317== at 0x10EEE0FD: pipe (pipe.c:29) ==26317== by 0x197C407D: ??? ==26317== by 0x14D814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26317== by 0x10A54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26317== by 0x109EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26317== by 0xF6E4D38: PetscInitialize (pinit.c:924) ==26317== by 0xF20EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26317== by 0xF20EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26317== by 0x16AA6B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26317== by 0x162E89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26317== by 0x1661D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26317== by 0x166070: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26317== by 0x166707: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26317== by 0x1612A5: main (TestPottsBasedCellPopulation.cpp:19) ==26317== ==26317== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26317== at 0x10EF2A9C: __open_nocancel (open64_nocancel.c:39) ==26317== by 0x10E76BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26317== by 0xF24C822: ??? ==26317== by 0xF24C96F: ??? ==26317== by 0x14E266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26317== by 0x14E26938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26317== by 0x14DDC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26317== by 0x14D812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26317== by 0x10A54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26317== by 0x109EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26317== by 0xF6E4D38: PetscInitialize (pinit.c:924) ==26317== by 0xF20EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26317== by 0xF20EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26317== by 0x16AA6B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26317== by 0x162E89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26317== by 0x1661D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26317== by 0x166070: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26317== by 0x166707: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26317== by 0x1612A5: main (TestPottsBasedCellPopulation.cpp:19) ==26317== ==26317== Open file descriptor 145: ==26317== ==26317== ==26317== Open file descriptor 142: ==26317== ==26317== ==26317== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==26317== ==26317== ==26317== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26317== ==26317== ==26317== ==26317== HEAP SUMMARY: ==26317== in use at exit: 35,199 bytes in 290 blocks ==26317== total heap usage: 58,788 allocs, 58,498 frees, 12,900,367 bytes allocated ==26317== ==26317== LEAK SUMMARY: ==26317== definitely lost: 0 bytes in 0 blocks ==26317== indirectly lost: 0 bytes in 0 blocks ==26317== possibly lost: 0 bytes in 0 blocks ==26317== still reachable: 56 bytes in 3 blocks ==26317== suppressed: 35,143 bytes in 287 blocks ==26317== Reachable blocks (those to which a pointer was found) are not shown. ==26317== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26317== ==26317== For lists of detected and suppressed errors, rerun with: -s ==26317== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)