==26345== Memcheck, a memory error detector ==26345== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26345== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26345== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26345== Parent PID: 24327 ==26345== ==26345== ==26345== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26345== Open file descriptor 12: ==26345== at 0x10E070FD: pipe (pipe.c:29) ==26345== by 0x197C407D: ??? ==26345== by 0x14D814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26345== by 0x10A54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26345== by 0x109EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26345== by 0xF6E4D38: PetscInitialize (pinit.c:924) ==26345== by 0xF20EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26345== by 0xF20EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26345== by 0x3F743D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26345== by 0x3EC0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26345== by 0x3F2114: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26345== by 0x3F1FB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26345== by 0x3F264B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26345== by 0x3EA515: main (TestVertexBasedCellPopulation.cpp:19) ==26345== ==26345== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26345== at 0x10E0BA9C: __open_nocancel (open64_nocancel.c:39) ==26345== by 0x10D8FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26345== by 0xF24C822: ??? ==26345== by 0xF24C96F: ??? ==26345== by 0x14E266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26345== by 0x14E26938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26345== by 0x14DDC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26345== by 0x14D812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26345== by 0x10A54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26345== by 0x109EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26345== by 0xF6E4D38: PetscInitialize (pinit.c:924) ==26345== by 0xF20EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26345== by 0xF20EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26345== by 0x3F743D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26345== by 0x3EC0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26345== by 0x3F2114: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26345== by 0x3F1FB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26345== by 0x3F264B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26345== by 0x3EA515: main (TestVertexBasedCellPopulation.cpp:19) ==26345== ==26345== Open file descriptor 145: ==26345== ==26345== ==26345== Open file descriptor 142: ==26345== ==26345== ==26345== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulation_valgrind.txt ==26345== ==26345== ==26345== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26345== ==26345== ==26345== ==26345== HEAP SUMMARY: ==26345== in use at exit: 35,199 bytes in 290 blocks ==26345== total heap usage: 154,925 allocs, 154,635 frees, 19,369,784 bytes allocated ==26345== ==26345== LEAK SUMMARY: ==26345== definitely lost: 0 bytes in 0 blocks ==26345== indirectly lost: 0 bytes in 0 blocks ==26345== possibly lost: 0 bytes in 0 blocks ==26345== still reachable: 56 bytes in 3 blocks ==26345== suppressed: 35,143 bytes in 287 blocks ==26345== Reachable blocks (those to which a pointer was found) are not shown. ==26345== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26345== ==26345== For lists of detected and suppressed errors, rerun with: -s ==26345== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)