==25578== Memcheck, a memory error detector ==25578== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25578== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25578== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25578== Parent PID: 24251 ==25578== ==25578== ==25578== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25578== Open file descriptor 12: ==25578== at 0xEE1A0FD: pipe (pipe.c:29) ==25578== by 0x197C507D: ??? ==25578== by 0x13D154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25578== by 0xEA69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25578== by 0xEA02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25578== by 0xD6D6D38: PetscInitialize (pinit.c:924) ==25578== by 0xD5A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25578== by 0xD5A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25578== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25578== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25578== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25578== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25578== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25578== by 0x1222F5: main (TestCell.cpp:19) ==25578== ==25578== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25578== at 0xEE1EA9C: __open_nocancel (open64_nocancel.c:39) ==25578== by 0xEDA2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25578== by 0xE966822: ??? ==25578== by 0xE96696F: ??? ==25578== by 0x13DBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25578== by 0x13DBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25578== by 0x13D70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25578== by 0x13D152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25578== by 0xEA69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25578== by 0xEA02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25578== by 0xD6D6D38: PetscInitialize (pinit.c:924) ==25578== by 0xD5A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25578== by 0xD5A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25578== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25578== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25578== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25578== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25578== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25578== by 0x1222F5: main (TestCell.cpp:19) ==25578== ==25578== Open file descriptor 145: ==25578== ==25578== ==25578== Open file descriptor 142: ==25578== ==25578== ==25578== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25578== ==25578== ==25578== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25578== ==25578== ==25578== ==25578== HEAP SUMMARY: ==25578== in use at exit: 35,254 bytes in 287 blocks ==25578== total heap usage: 5,167,352 allocs, 5,167,065 frees, 488,108,854 bytes allocated ==25578== ==25578== LEAK SUMMARY: ==25578== definitely lost: 0 bytes in 0 blocks ==25578== indirectly lost: 0 bytes in 0 blocks ==25578== possibly lost: 0 bytes in 0 blocks ==25578== still reachable: 184 bytes in 4 blocks ==25578== suppressed: 35,070 bytes in 283 blocks ==25578== Reachable blocks (those to which a pointer was found) are not shown. ==25578== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25578== ==25578== For lists of detected and suppressed errors, rerun with: -s ==25578== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)