==25829== Memcheck, a memory error detector ==25829== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25829== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25829== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25829== Parent PID: 24251 ==25829== ==25829== ==25829== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25829== Open file descriptor 12: ==25829== at 0x111620FD: pipe (pipe.c:29) ==25829== by 0x197C407D: ??? ==25829== by 0x14D764CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25829== by 0x10DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25829== by 0x10D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25829== by 0xFA3FD38: PetscInitialize (pinit.c:924) ==25829== by 0xF5ABE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25829== by 0xF5ABEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25829== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25829== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25829== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25829== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25829== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25829== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25829== ==25829== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25829== at 0x11166A9C: __open_nocancel (open64_nocancel.c:39) ==25829== by 0x110EABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25829== by 0xF5E9822: ??? ==25829== by 0xF5E996F: ??? ==25829== by 0x14E1B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25829== by 0x14E1B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25829== by 0x14DD1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25829== by 0x14D762DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25829== by 0x10DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25829== by 0x10D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25829== by 0xFA3FD38: PetscInitialize (pinit.c:924) ==25829== by 0xF5ABE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25829== by 0xF5ABEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25829== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25829== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25829== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25829== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25829== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25829== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25829== ==25829== Open file descriptor 145: ==25829== ==25829== ==25829== Open file descriptor 142: ==25829== ==25829== ==25829== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithParabolicBoxDomainPdeModifier_valgrind.txt ==25829== ==25829== ==25829== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25829== ==25829== ==25829== ==25829== HEAP SUMMARY: ==25829== in use at exit: 35,126 bytes in 286 blocks ==25829== total heap usage: 4,552,888 allocs, 4,552,602 frees, 506,355,059 bytes allocated ==25829== ==25829== LEAK SUMMARY: ==25829== definitely lost: 0 bytes in 0 blocks ==25829== indirectly lost: 0 bytes in 0 blocks ==25829== possibly lost: 0 bytes in 0 blocks ==25829== still reachable: 56 bytes in 3 blocks ==25829== suppressed: 35,070 bytes in 283 blocks ==25829== Reachable blocks (those to which a pointer was found) are not shown. ==25829== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25829== ==25829== For lists of detected and suppressed errors, rerun with: -s ==25829== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)