==25603== Memcheck, a memory error detector ==25603== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25603== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25603== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==25603== Parent PID: 24260 ==25603== ==25603== ==25603== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25603== Open file descriptor 12: ==25603== at 0xF2AA0FD: pipe (pipe.c:29) ==25603== by 0x199CE07D: ??? ==25603== by 0x13F704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25603== by 0xEEF7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0xEE90D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0xDB87D38: PetscInitialize (pinit.c:924) ==25603== by 0xD9F6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25603== by 0xD9F6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25603== by 0x1360AB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25603== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25603== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25603== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25603== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25603== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25603== ==25603== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25603== at 0xF2AEA9C: __open_nocancel (open64_nocancel.c:39) ==25603== by 0xF232BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25603== by 0xDA34822: ??? ==25603== by 0xDA3496F: ??? ==25603== by 0x140156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25603== by 0x14015938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25603== by 0x13FCB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25603== by 0x13F702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25603== by 0xEEF7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0xEE90D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0xDB87D38: PetscInitialize (pinit.c:924) ==25603== by 0xD9F6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25603== by 0xD9F6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25603== by 0x1360AB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25603== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25603== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25603== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25603== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25603== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25603== ==25603== Open file descriptor 145: ==25603== ==25603== ==25603== Open file descriptor 142: ==25603== ==25603== ==25603== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==25603== ==25603== ==25603== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25603== ==25603== ==25603== ==25603== HEAP SUMMARY: ==25603== in use at exit: 35,142 bytes in 287 blocks ==25603== total heap usage: 4,163,324 allocs, 4,163,037 frees, 439,004,691 bytes allocated ==25603== ==25603== LEAK SUMMARY: ==25603== definitely lost: 0 bytes in 0 blocks ==25603== indirectly lost: 0 bytes in 0 blocks ==25603== possibly lost: 0 bytes in 0 blocks ==25603== still reachable: 72 bytes in 4 blocks ==25603== suppressed: 35,070 bytes in 283 blocks ==25603== Reachable blocks (those to which a pointer was found) are not shown. ==25603== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25603== ==25603== For lists of detected and suppressed errors, rerun with: -s ==25603== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)