==25702== Memcheck, a memory error detector ==25702== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25702== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25702== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleCellCycleModels -malloc_debug -malloc_dump -memory_info ==25702== Parent PID: 24260 ==25702== ==25702== ==25702== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25702== Open file descriptor 12: ==25702== at 0xF0660FD: pipe (pipe.c:29) ==25702== by 0x199CE07D: ??? ==25702== by 0x13F1F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25702== by 0xECB5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25702== by 0xEC4ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25702== by 0xD945D38: PetscInitialize (pinit.c:924) ==25702== by 0xD7B2E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25702== by 0xD7B2EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25702== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25702== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25702== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25702== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25702== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25702== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==25702== ==25702== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25702== at 0xF06AA9C: __open_nocancel (open64_nocancel.c:39) ==25702== by 0xEFEEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25702== by 0xD7F0822: ??? ==25702== by 0xD7F096F: ??? ==25702== by 0x13FC46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25702== by 0x13FC4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25702== by 0x13F7A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25702== by 0x13F1F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25702== by 0xECB5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25702== by 0xEC4ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25702== by 0xD945D38: PetscInitialize (pinit.c:924) ==25702== by 0xD7B2E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25702== by 0xD7B2EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25702== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25702== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25702== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25702== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25702== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25702== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==25702== ==25702== Open file descriptor 145: ==25702== ==25702== ==25702== Open file descriptor 142: ==25702== ==25702== ==25702== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModels_valgrind.txt ==25702== ==25702== ==25702== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25702== ==25702== ==25702== ==25702== HEAP SUMMARY: ==25702== in use at exit: 35,231 bytes in 291 blocks ==25702== total heap usage: 62,972 allocs, 62,681 frees, 11,190,589 bytes allocated ==25702== ==25702== LEAK SUMMARY: ==25702== definitely lost: 0 bytes in 0 blocks ==25702== indirectly lost: 0 bytes in 0 blocks ==25702== possibly lost: 0 bytes in 0 blocks ==25702== still reachable: 88 bytes in 4 blocks ==25702== suppressed: 35,143 bytes in 287 blocks ==25702== Reachable blocks (those to which a pointer was found) are not shown. ==25702== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25702== ==25702== For lists of detected and suppressed errors, rerun with: -s ==25702== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)