==40650== Memcheck, a memory error detector ==40650== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40650== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40650== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellBetaCateninWriter -malloc_debug -malloc_dump -memory_info ==40650== Parent PID: 24253 ==40650== ==40650== ==40650== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40650== Open file descriptor 12: ==40650== at 0x112120FD: pipe (pipe.c:29) ==40650== by 0x1B48807D: ??? ==40650== by 0x144C54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40650== by 0x11BF1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40650== by 0x11B8AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40650== by 0x11D36D38: PetscInitialize (pinit.c:924) ==40650== by 0x10B33E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40650== by 0x10B33EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40650== by 0x136DE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40650== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40650== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40650== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40650== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40650== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40650== ==40650== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40650== at 0x11216A9C: __open_nocancel (open64_nocancel.c:39) ==40650== by 0x1119ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40650== by 0x6122822: ??? ==40650== by 0x612296F: ??? ==40650== by 0x1456A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40650== by 0x1456A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40650== by 0x14520922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40650== by 0x144C52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40650== by 0x11BF1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40650== by 0x11B8AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40650== by 0x11D36D38: PetscInitialize (pinit.c:924) ==40650== by 0x10B33E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40650== by 0x10B33EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40650== by 0x136DE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40650== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40650== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40650== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40650== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40650== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40650== ==40650== Open file descriptor 145: ==40650== ==40650== ==40650== Open file descriptor 142: ==40650== ==40650== ==40650== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBetaCateninWriter_valgrind.txt ==40650== ==40650== ==40650== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40650== ==40650== ==40650== ==40650== HEAP SUMMARY: ==40650== in use at exit: 35,295 bytes in 291 blocks ==40650== total heap usage: 47,308 allocs, 47,017 frees, 10,013,458 bytes allocated ==40650== ==40650== LEAK SUMMARY: ==40650== definitely lost: 0 bytes in 0 blocks ==40650== indirectly lost: 0 bytes in 0 blocks ==40650== possibly lost: 0 bytes in 0 blocks ==40650== still reachable: 136 bytes in 4 blocks ==40650== suppressed: 35,159 bytes in 287 blocks ==40650== Reachable blocks (those to which a pointer was found) are not shown. ==40650== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40650== ==40650== For lists of detected and suppressed errors, rerun with: -s ==40650== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)