==25563== Memcheck, a memory error detector ==25563== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25563== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25563== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==25563== Parent PID: 24253 ==25563== ==25563== ==25563== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25563== Open file descriptor 12: ==25563== at 0xEE5C0FD: pipe (pipe.c:29) ==25563== by 0x197C507D: ??? ==25563== by 0x13D154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25563== by 0xEAAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0xEA44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0xD73BD38: PetscInitialize (pinit.c:924) ==25563== by 0xD5A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25563== by 0xD5A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25563== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25563== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25563== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25563== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25563== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25563== by 0x125225: main (TestCellMutationStates.cpp:19) ==25563== ==25563== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25563== at 0xEE60A9C: __open_nocancel (open64_nocancel.c:39) ==25563== by 0xEDE4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25563== by 0xD5E6822: ??? ==25563== by 0xD5E696F: ??? ==25563== by 0x13DBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25563== by 0x13DBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25563== by 0x13D70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25563== by 0x13D152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25563== by 0xEAAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0xEA44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25563== by 0xD73BD38: PetscInitialize (pinit.c:924) ==25563== by 0xD5A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25563== by 0xD5A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25563== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25563== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25563== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25563== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25563== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25563== by 0x125225: main (TestCellMutationStates.cpp:19) ==25563== ==25563== Open file descriptor 145: ==25563== ==25563== ==25563== Open file descriptor 142: ==25563== ==25563== ==25563== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==25563== ==25563== ==25563== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25563== ==25563== ==25563== ==25563== HEAP SUMMARY: ==25563== in use at exit: 35,199 bytes in 290 blocks ==25563== total heap usage: 36,997 allocs, 36,707 frees, 7,840,772 bytes allocated ==25563== ==25563== LEAK SUMMARY: ==25563== definitely lost: 0 bytes in 0 blocks ==25563== indirectly lost: 0 bytes in 0 blocks ==25563== possibly lost: 0 bytes in 0 blocks ==25563== still reachable: 56 bytes in 3 blocks ==25563== suppressed: 35,143 bytes in 287 blocks ==25563== Reachable blocks (those to which a pointer was found) are not shown. ==25563== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25563== ==25563== For lists of detected and suppressed errors, rerun with: -s ==25563== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)